Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2345 ATGAATTCGTCATCAATTCCGGATTGTGTCGATAAATGGGTGAACAATGTCCATGAACAAACTGTTCAACATGAGCAAGAAAGTATTGGCAATATAGGACGTCTCTTGGAAATGCAGTTTAATTCTGAGGAGGTGGCTTATGATTTTTATAATGCGTACAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGCAAATAAAAGTAAAGTAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAGGGTACACGAGGTGTTGACTAA 276 0.3659 MNSSSIPDCVDKWVNNVHEQTVQHEQESIGNIGRLLEMQFNSEEVAYDFYNAYSKRIGFGIRREYANKSKVDGVLTSRRFTCFKEGTRGVD* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2345 91 Pfam FAR1 DNA-binding domain 48 88 IPR004330 -
Mal1g2345 91 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 88 - -
Mal1g2345 91 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 12 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2345 Mal-Chr1 31289663 31289938 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g2345 FAR1 2.7e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2345 K17604 - mtr:MTR_1g057920 150.984