Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2327 ATGGAAGGAGAAAGTAACAACAAAGAGAACAGTTCAGAGCTAGCAACATATGAAAATGAAGGAACAAGCAACCATGATGTTTCTGAGGAACATCAAATTCAAAACCAACACTTTGGAAGAAGTGGGGTTGAGTGGAATTTCTTACCAAAACTACCTCAAAACAACTATGTTGAATATCTCTCTGAATCTTCAGCTTATCTTGCAAACACTACTACAACAACTGAGTATGATATGATTGGGAATAGCCATTATCATTCACTTGGTAGTAGCAGCAGCAGCTTCAATGATCCTGGAAAAGCTGCTTTTGGTTTTAAGCTGATTGATTCTTCAAGTCATGATTTTGGTGTTAGGAAGCGTGTAGGGTTTTGGAGACATGATGAAGGAGAGGAAGCACTTAATGTTGAAGCTGGAAGTAGTCAAAATCTTACCTATGCTGAGGGTCATGCAACATGGACACCTGATTCAGTTGGAGATAATCACTTTGCTTCACAATATGATCATATGGGAGCAGTTGCTGCACCTTCTTTACTTCCAATTCCAAAATCAGGAAGCAGCTCCAAAAAACAGAAAAGTGAGAAAATACGTTGCACTGACCGTCAACGCAGGCAACGTATCGCTGATAACCTCAAAGCTTTGCATGAATTGCTGCCAACTCCAGAAGTGGGTAGTCAAGCACAAGCTTACATACTGGATGATATCATTGACTATGTTAAATACTTGCAGATTCAAGTAAAGGAACTAAGTGGAACTAAATTGCAAGCTGATTCAAATGCTGTACCACTAGTTTTCCATGAGGGTTATGGACATTATATAAAGGACCAGGTGTTGAATGAGCCTCTTGAAGAGATAATGGGGAAACTACTTGAAGTAAATTCAGCAGAAACATGTCAGCTACTTGACAACAAAGGTCTTGTTCTGCTGCCTATTGCTTTGGTTGATGATCTGAACCAAGCTATGCAATGGTTGATGAACCAAGCTAACTAG 984 0.3963 MEGESNNKENSSELATYENEGTSNHDVSEEHQIQNQHFGRSGVEWNFLPKLPQNNYVEYLSESSAYLANTTTTTEYDMIGNSHYHSLGSSSSSFNDPGKAAFGFKLIDSSSHDFGVRKRVGFWRHDEGEEALNVEAGSSQNLTYAEGHATWTPDSVGDNHFASQYDHMGAVAAPSLLPIPKSGSSSKKQKSEKIRCTDRQRRQRIADNLKALHELLPTPEVGSQAQAYILDDIIDYVKYLQIQVKELSGTKLQADSNAVPLVFHEGYGHYIKDQVLNEPLEEIMGKLLEVNSAETCQLLDNKGLVLLPIALVDDLNQAMQWLMNQAN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2327 327 CDD bHLH_AtbHLH_like 197 248 IPR045239 -
Mal1g2327 327 Pfam Helix-loop-helix DNA-binding domain 196 241 IPR011598 GO:0046983
Mal1g2327 327 MobiDBLite consensus disorder prediction 1 35 - -
Mal1g2327 327 Gene3D - 182 255 IPR036638 GO:0046983
Mal1g2327 327 SMART finulus 195 246 IPR011598 GO:0046983
Mal1g2327 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 252 IPR036638 GO:0046983
Mal1g2327 327 MobiDBLite consensus disorder prediction 8 22 - -
Mal1g2327 327 PANTHER TRANSCRIPTION FACTOR BHLH66-LIKE ISOFORM X1 26 312 - -
Mal1g2327 327 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 312 - -
Mal1g2327 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 240 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2327 Mal-Chr1 31033114 31035706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2327 169 318 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 33.987 5.48e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g2327 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2327 - - mtr:MTR_1g072530 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2327 1 31033114 31035706 Mal1g2327 1 31033114 31035706 ECH