Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2311 ATGGCAGATGCAGCGAACCAATGCGATGAAAGCCACGAGAGTGGTGGTGAACAGAGTCCACGTGGTTCTTCCTCTGCTTCGCGTGAACAAGATCGTTTTTTGCCTATAGCTAACATTAGCAGAATCATGAAAAAAGCTTTACCTTCAAATGGGAAAATTGCTAAGGATGCTAAAGACACGATGCAAGAATGTGTTTCTGAATTCATCAGCTTTATTACCAGCGAGGCTAGTGAGAAATGCCAGAAAGAGAAGAGAAAGACCATTAATGGAGATGATTTGTTATGGGCTATGGCTACTTTAGGATTTGAAGACTATATAGAACCGCTTAAGGTGTACCTAGCAAGGTACAGAGAGGTAATTTTACTTTTTTTTTTGCCTCAGTTAATGTTTGTTTTTGGATTATTCATATACAATGTTATGAAGTGA 426 0.3897 MADAANQCDESHESGGEQSPRGSSSASREQDRFLPIANISRIMKKALPSNGKIAKDAKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREVILLFFLPQLMFVFGLFIYNVMK* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2311 141 ProSitePatterns NF-YB/HAP3 subunit signature. 64 80 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mal1g2311 141 Gene3D Histone, subunit A 20 120 IPR009072 GO:0046982
Mal1g2311 141 SUPERFAMILY Histone-fold 30 119 IPR009072 GO:0046982
Mal1g2311 141 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-8 1 127 - -
Mal1g2311 141 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g2311 141 MobiDBLite consensus disorder prediction 11 31 - -
Mal1g2311 141 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mal1g2311 141 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 97 IPR003958 -
Mal1g2311 141 PRINTS CCAAT-binding transcription factor subunit A signature 80 98 - -
Mal1g2311 141 PRINTS CCAAT-binding transcription factor subunit A signature 61 79 - -
Mal1g2311 141 PRINTS CCAAT-binding transcription factor subunit A signature 99 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2311 Mal-Chr1 30815459 30816311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2311 11 119 CCAAT-HAP3 Transcription Factor Family AT2G37060 83.486 1.44e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal1g2311 CBFD_NFYB_HMF 2.7e-29 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2311 K08065 - gmx:100779577 209.92