Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2299 ATGTTTTCAGGAGTGATAGAAGGAAACACAGGATGGAGTGTAATAGAAGAAGATAAATGGAGGAAAGGACCTTGGACTACTGAGGAAGACAAATTACTCATTGAGTATGTCAAGCAGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGGACTGAGAAGAAATGGGAAAAGTTGTAGATTGAGATGGGTGAACTACTTAAGACCTGATCTCAAGAAGGGTCAGATAACACCACAAGAAGAAAGCATAATCCTAGAGCTACATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGTTTGCCAGGAAGAACGGACAATGAGATAAAGAATTATTGGAGGACTCATTTCAAGAAAAAGACCAAAAAAACCTCTGACGCTGCTGAAAAGGCGAAAAACCGTTCATTCAAGAGGCAGCAACAACAACAGTTGAAGCACCAGCAACAGTTTCAGCAGCAACAACAACTGCAATACAATTTGGACATGAAAGGGATTATAGACTTGTTGCTTGAGGAAAATGACTACTATAGTGTGCCTTCTACATCTCAAGAGACACAAGAAATGGTTACCATGTATGGAGAAACACCAGAACAACAGGGCCTTGTCTACCCTATGCTTAATGGTTATGGTAATGTTTATGCACAAGAGTCCTCAAATGAAGAAATTTTGTGGGATGGGCTTTGGAACATGGATGATGTTCTTGGAAATTCAATGCAGTTAATGTTACAAGCAAAGCCAGCCAATGTGCACAACTTAGCTACTCCCTTTTGTTAA 783 0.41 MFSGVIEGNTGWSVIEEDKWRKGPWTTEEDKLLIEYVKQHGEGRWNSVARLAGLRRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKKTSDAAEKAKNRSFKRQQQQQLKHQQQFQQQQQLQYNLDMKGIIDLLLEENDYYSVPSTSQETQEMVTMYGETPEQQGLVYPMLNGYGNVYAQESSNEEILWDGLWNMDDVLGNSMQLMLQAKPANVHNLATPFC* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2299 260 MobiDBLite consensus disorder prediction 125 139 - -
Mal1g2299 260 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mal1g2299 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Mal1g2299 260 SMART sant 74 122 IPR001005 -
Mal1g2299 260 SMART sant 21 71 IPR001005 -
Mal1g2299 260 Gene3D - 79 160 - -
Mal1g2299 260 CDD SANT 24 69 IPR001005 -
Mal1g2299 260 MobiDBLite consensus disorder prediction 123 151 - -
Mal1g2299 260 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mal1g2299 260 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Mal1g2299 260 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Mal1g2299 260 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 248 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal1g2299 260 CDD SANT 79 120 IPR001005 -
Mal1g2299 260 Gene3D - 22 74 - -
Mal1g2299 260 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mal1g2299 260 PANTHER MYB TRANSCRIPTION FACTOR 1 248 - -
Mal1g2299 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2299 Mal-Chr1 30561746 30562770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2299 17 260 MYB Transcription Factor Family AT4G13480 54.545 4.62e-84 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g2299 Myb_DNA-binding 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2299 K09422 - gmx:100782089 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2299 1 30561746 30562770 Mal1g2299 1 30561746 30562770 ECH