Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2298 ATGAGCAATTCAATGGATCCCAAAACCGGGTTTAACTCCATTTCCAGAACCTTCCACAGTCTAAGACCCCCACTCAACCTTCCTCCACCACACGCCAATATCTCCGCCGTAGAATACACCCTCTCCCTCCACCACTCCGACTCCGGCTCACACACTTTCCTCATCGACTCAACCACATCTCACAAACTCTCTTACTCTACCTTCATCCAACGCTCGAAAACCCTCGCAAACAACCTCACTCTCCGCGGTCTCACCAAACACCACACAGCATTCATTCTTTCTCCAAACCTCATTCAGGTACCAATCCTCTACTTCGCATTACTCTCCCTTGGCGTGGTCGTTTCACCGGCAAACCCAATTTCCACTCCCACCGAAATTTCTCATCTCGTAAACCTCTCGAAACCGGTTATCGCTTTTACGACGTCGTTTTTATCTCACAAACTTCCGAAACTCGCATTTGGAACGATTCTCATTGACTCGTCTGTGTTCGACTCACTCACGACGGAAGAATGTGTTGGTTCGACGGTGTTGCCGCCGCTGGAGGTGAGTCAATCCGACGTGGCGGCGATTCTGTACTCGTCGGGAACCACAGGGAAATCGAAAGGAGTGATGCTTACTCACCGGAATTTGACAGCGACGGTGGCGGCATACAATGCCGTTCGAATTCCGACGGCGAGTCCTGCGGTTTGTTTGCTGACGGTGCCGTGTTTTCATGTGTACGGTTTTACGTACCTTTTGAAGGTGGTGGCGATGATGGAAACGGTGGTGGTGATGGAGAGGTTTGAATTGGGGAAAATGCTGAGTGCTGTGGAGAGGTTTAGAGTGAGTAATATTGTGGCGGCGCCACCGGTGGTGGTGGCGATGAGTAAAGAGGGAGTGGTGGATGGGTATGATTTATCTTCGTTGAAAACCATGGTTTGTGGCGGTGCTCCGTTGGGAAAGGAAAATTCCAATGCTTTCAAGGCAAAGTTCCCTCATGTATCCATTACTCAGTAG 996 0.502 MSNSMDPKTGFNSISRTFHSLRPPLNLPPPHANISAVEYTLSLHHSDSGSHTFLIDSTTSHKLSYSTFIQRSKTLANNLTLRGLTKHHTAFILSPNLIQVPILYFALLSLGVVVSPANPISTPTEISHLVNLSKPVIAFTTSFLSHKLPKLAFGTILIDSSVFDSLTTEECVGSTVLPPLEVSQSDVAAILYSSGTTGKSKGVMLTHRNLTATVAAYNAVRIPTASPAVCLLTVPCFHVYGFTYLLKVVAMMETVVVMERFELGKMLSAVERFRVSNIVAAPPVVVAMSKEGVVDGYDLSSLKTMVCGGAPLGKENSNAFKAKFPHVSITQ* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2298 331 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Mal1g2298 331 SUPERFAMILY Acetyl-CoA synthetase-like 36 329 - -
Mal1g2298 331 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 331 - -
Mal1g2298 331 Gene3D - 65 206 - -
Mal1g2298 331 Pfam AMP-binding enzyme 50 326 IPR000873 -
Mal1g2298 331 Gene3D - 62 331 - -
Mal1g2298 331 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 7 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2298 Mal-Chr1 30534051 30538293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2298 2 331 Monolignol Biosynthesis Gene Families AT5G63380 43.188 1.59e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2298 - - pop:18106953 358.221