Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2297 ATGGAAGCTAAAATAGTGAACCCAAACACAGGAGAGGCCATGTCTCCTGGTGAACAAGGGGAACTTTGGGTTAGAGGACCTCCAATTATGAAAGGTTATGTTGGTGATCTAGTGGCAACTTCTGTTACTTTAGTGGATGGATGGTTGAGAACTGGGGATATTTGCTATTTTGACAATGAAGGTTTCGTGTATGTTGTAGACAGGTTGAAAGAATTGATCAAATATAAAGGTTACCAGGTGGCTCCTGCAGAGCTGGAACAATTGCTCCAATCTCACCCAGAGATAAAAGATGCTGCAGTTATCCCATACCCTGATGAGGATGCTGGCCAGGTTCCCCTAGCTGTGGTGATAAGGCAGACTCACAGCTCCATGGGTGAAGCAGAAATAATAAATTTTGTAGCCAAACAGGTTGCAGCATACAAGAAGATAAGGCGTGTCGTATTTGTCAATTCCATACCAAAGAATGCAGCAGGAAAGATATTGAGGAAGGACTTGTTGAATAAAATTCTCCTCCAACGGACTTTCCCTAGGTTATAA 537 0.4283 MEAKIVNPNTGEAMSPGEQGELWVRGPPIMKGYVGDLVATSVTLVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDEDAGQVPLAVVIRQTHSSMGEAEIINFVAKQVAAYKKIRRVVFVNSIPKNAAGKILRKDLLNKILLQRTFPRL* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2297 178 Gene3D - 71 170 IPR045851 -
Mal1g2297 178 SUPERFAMILY Acetyl-CoA synthetase-like 1 168 - -
Mal1g2297 178 Pfam AMP-binding enzyme C-terminal domain 84 159 IPR025110 -
Mal1g2297 178 Pfam AMP-binding enzyme 2 75 IPR000873 -
Mal1g2297 178 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 168 - -
Mal1g2297 178 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 1 168 - -
Mal1g2297 178 Gene3D - 1 70 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2297 Mal-Chr1 30532166 30534000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2297 1 165 Monolignol Biosynthesis Gene Families AT5G63380 64.458 2.27e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2297 - - lja:Lj1g3v3833570.1 293.508