LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g2297	ATGGAAGCTAAAATAGTGAACCCAAACACAGGAGAGGCCATGTCTCCTGGTGAACAAGGGGAACTTTGGGTTAGAGGACCTCCAATTATGAAAGGTTATGTTGGTGATCTAGTGGCAACTTCTGTTACTTTAGTGGATGGATGGTTGAGAACTGGGGATATTTGCTATTTTGACAATGAAGGTTTCGTGTATGTTGTAGACAGGTTGAAAGAATTGATCAAATATAAAGGTTACCAGGTGGCTCCTGCAGAGCTGGAACAATTGCTCCAATCTCACCCAGAGATAAAAGATGCTGCAGTTATCCCATACCCTGATGAGGATGCTGGCCAGGTTCCCCTAGCTGTGGTGATAAGGCAGACTCACAGCTCCATGGGTGAAGCAGAAATAATAAATTTTGTAGCCAAACAGGTTGCAGCATACAAGAAGATAAGGCGTGTCGTATTTGTCAATTCCATACCAAAGAATGCAGCAGGAAAGATATTGAGGAAGGACTTGTTGAATAAAATTCTCCTCCAACGGACTTTCCCTAGGTTATAA	537	0.4283	MEAKIVNPNTGEAMSPGEQGELWVRGPPIMKGYVGDLVATSVTLVDGWLRTGDICYFDNEGFVYVVDRLKELIKYKGYQVAPAELEQLLQSHPEIKDAAVIPYPDEDAGQVPLAVVIRQTHSSMGEAEIINFVAKQVAAYKKIRRVVFVNSIPKNAAGKILRKDLLNKILLQRTFPRL*	179

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g2297	178	Gene3D	-	71	170	IPR045851	-
	Mal1g2297	178	SUPERFAMILY	Acetyl-CoA synthetase-like	1	168	-	-
	Mal1g2297	178	Pfam	AMP-binding enzyme C-terminal domain	84	159	IPR025110	-
	Mal1g2297	178	Pfam	AMP-binding enzyme	2	75	IPR000873	-
	Mal1g2297	178	PANTHER	LONG-CHAIN-FATTY-ACID--COA LIGASE	1	168	-	-
	Mal1g2297	178	PANTHER	4-COUMARATE--COA LIGASE-LIKE 9	1	168	-	-
	Mal1g2297	178	Gene3D	-	1	70	IPR042099	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g2297	Mal-Chr1	30532166	30534000	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g2297	1	165	Monolignol Biosynthesis Gene Families	AT5G63380	64.458	2.27e-78	241

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g2297	-		-	lja:Lj1g3v3833570.1	293.508

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