Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2296 ATGCCTATAATTGACAAATTCAAAGACATGATGGGAACTGTTGTTGTGGGCAAAGTTGAGTCTGGTACTATTCGGGAGGGAAATTCTCTTTTGATTATGCCAAACAAGGATCATGTAAAAGTTGTTGCTATATATATCGATAAAAATCGGGTTAAATGGGCTGGACCTGGTGAAAATCCACGGGTTCAATTATCCGGTGTTGAACCAAAAGACATATTGTCTGGGTTCGTCCTATCTAGTGTTGCAAATCCAATATCAGCATTTACTGATTTTGTTGCTAAGTTGCAGATTCTTGAATTACCGGACAATGCTATTTTTAGTGCTGGATACAAAGCTGTTCTTCACATCCACTCTGTAGTTGAGGAATGTGAGATTGTTGAGCTATTGCAACAAATTGATCCAATGACAGAGAAGCCTATGACAAATAAAGTTCTCTTCATAAACAATGGTGCTATTGTATTATGCCGTGTTCAGGTTAATAACATGATATGCGTTGAGAAGTTCTCTGATTTTCCACCACTAGGGAGGATCACTCTTTGCACTGAAGGAAAAACTGTTGCTGTGGGAATAGTCACTGCTGTGAGTTTGTAA 591 0.3858 MPIIDKFKDMMGTVVVGKVESGTIREGNSLLIMPNKDHVKVVAIYIDKNRVKWAGPGENPRVQLSGVEPKDILSGFVLSSVANPISAFTDFVAKLQILELPDNAIFSAGYKAVLHIHSVVEECEIVELLQQIDPMTEKPMTNKVLFINNGAIVLCRVQVNNMICVEKFSDFPPLGRITLCTEGKTVAVGIVTAVSL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2296 196 CDD eRF3_C_III 91 192 - -
Mal1g2296 196 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 89 194 IPR009001 -
Mal1g2296 196 Gene3D Translation factors 1 82 - -
Mal1g2296 196 CDD eRF3_II 1 80 - -
Mal1g2296 196 PANTHER TRANSLATION FACTOR 1 189 - -
Mal1g2296 196 Pfam Elongation factor Tu domain 2 12 78 IPR004161 GO:0005525
Mal1g2296 196 Pfam Elongation factor Tu C-terminal domain 84 194 IPR004160 -
Mal1g2296 196 Gene3D Translation factors 87 195 - -
Mal1g2296 196 SUPERFAMILY Translation proteins 1 84 IPR009000 -
Mal1g2296 196 PANTHER BNAA06G12300D PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2296 Mal-Chr1 30528256 30530988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2296 1 194 Eukaryotic Initiation Factors Gene Family AT5G10630 29.592 9.63e-23 93.2