Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2287 ATGTTGTTTACATTTCCATTTTATCAATGTTTACAGGATGAAATTTCAAGCCCTCTAAGCGCTCGAATTTTCGAACTATGTAACCCTGAATTATTTCCAGAAGCTCTGCAGAATTCTGAGGTTACATCAAGCTCAAATTGTTGCTATGAAGAGAATTCATCATATGCAACAAATATATTAGATGTAGAAAATAAGTTCAATAATAGTATTAGCAATAATAATACAGTAGTCACAACTCCAACTAGCACAAACAACAACATCAACAACAATAATAATTCCAACAATAGCAATAATCTATCAGCTATCTTTGATTCACAAGAAGAAATTGACAATGACATTTCTGCTTCAATAGATTTCTCACTATCACCATCTTTCAATGTTCCTTCATTCCTTCCAGTCGCATCGTCACAGCAAGTAGAACAATTTGATTTCTCTTCTGTGCAGCCTCATCATCATGTTCAACTAACACCATGTTCATCTGTTGATGGGTTTTCACAGTATCATAATAATCCAAATGATTCAGTTGCACCTCTTATGGGAGCTCCATTATCATTACCACCTGTTTTTGAAGAGGATTGCATTACTTCTGTACCTTCTTATGTTCCTTTGAACCCTTCTTCTTCTTCTCCTTCTTGCAATTATCTTAGTCCTGCCGGCATGGCCGCATACATGCCTAATGGTTCTCTTACTACAGCTTTGTCTACTGATAGTTCTGGTTTGTTTGGTGGAAATATGCTTCTTGGTTCTGAACTTCAGACACAAGAACTTGATTATCAAGGAGATAATGGTAGAATTTATTGTCCTGATCCTATTCAGAGGGTGTTTAACCCTCCTGACCTTCAGGGACTTAATTCTGAGAATCAACAACTAGTAGCTGGTTCTGGTAGTTCTGCCACTATGACACCAGAAATCTCAAACTTGGAGGACTCCACTTTCAAGGTTGGAAAACTTTCTGTTGAACAAAGGAAAGAAAAGATTCACAGATACATGAAGAAAAGAAATGAAAGAAACTTTAGCAAGAAAATTAAGTATGCATGCCGAAAAACTCTGGCTGATAGCCGACCTCGAGTTAGAGGACGATTTGCAAAGAATGATGATTTTGGAGATACAAATAGAACTGCTAGTGGCAATCATGAAGAAGAAGATGAAGAAGAGGTAGTTGTGAAAGAGGAAGATGATATGGTTGATTCCTCAGATATATTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAATCATGGATTTGA 1263 0.3682 MLFTFPFYQCLQDEISSPLSARIFELCNPELFPEALQNSEVTSSSNCCYEENSSYATNILDVENKFNNSISNNNTVVTTPTSTNNNINNNNNSNNSNNLSAIFDSQEEIDNDISASIDFSLSPSFNVPSFLPVASSQQVEQFDFSSVQPHHHVQLTPCSSVDGFSQYHNNPNDSVAPLMGAPLSLPPVFEEDCITSVPSYVPLNPSSSSPSCNYLSPAGMAAYMPNGSLTTALSTDSSGLFGGNMLLGSELQTQELDYQGDNGRIYCPDPIQRVFNPPDLQGLNSENQQLVAGSGSSATMTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTNRTASGNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2287 420 MobiDBLite consensus disorder prediction 360 379 - -
Mal1g2287 420 ProSiteProfiles CCT domain profile. 322 364 IPR010402 GO:0005515
Mal1g2287 420 MobiDBLite consensus disorder prediction 360 388 - -
Mal1g2287 420 PANTHER CCT MOTIF FAMILY PROTEIN 12 420 - -
Mal1g2287 420 Pfam CCT motif 322 364 IPR010402 GO:0005515
Mal1g2287 420 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 12 420 - -
Mal1g2287 420 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2287 Mal-Chr1 30422448 30425624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2287 302 371 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 1.83e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g2287 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2287 - - aprc:113871720 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2287 1 30422448 30425624 Mal1g2287 1 30422448 30425624 ECH