Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2285 ATGGCAAACGGGTCTTCTTTTGATCGCCATGAAGGTGAAACTTTTACTGAATTTCATGGAAACGGCGGTTGTCTTGTCGAGGATCGTATTGATAATGCTGATCATGACAAAGCTAAACAAAAATCTTTGTTTTGTCAATTTTTTTCGGTTTACCTGAAGGAGAATTGTAGTAGAGGCAATGTGAGGCCTGTGCCAGTGATGCTCGGTGACGGTCAATTGCTTGATTTGTATCAATTGTTCTCCCTTGTGAAGGAAAAAGGTGGGTATGATGCGGTATCGAGAAAAGGGATGTGGGATTCTGTGATAGATGAACTGGGTTTGGACCTTCGTGTTTTGCCTTCGGTGAAATTAGTTTTTGGCAAATATTTGAGTGGTTTCGATGGTTGGCTCAGCAAAACTTTCGAAGAGAAGAGTTTCAAAAGTGGGAATCATGGGTATTTGAATTCATTGCCAATTGATCTAGAAAAAGAGTTCCGAAGCCTTTTATGCTCAAATCTAAAGGACAAAGATGATGATTTTGTCCCGTTAGAATCTAGTGACATCATAAAGCACCTTGATCTGGTTAACCACAAGAGTGATGGTTATTTATTGGACAATATAAACCAAAATAACAAATCCGAGGGTGTCCAAAATGTTAACAGTGATGGTAATGGCGGCGAAAATGAAAAATTCGGCACTGGTATTAAGGATGATCTAACTGCCTCTTGTGCAGAAACTTCTGAGAAGGAATTTAATTCTCGCAAACGAAAACGGGAATCGTTGTCGGGAATGGTAAACTGGACAAGGAATATCGCAAAACATCCATTTGATCCTGTAGCTCAACCGTTGCCAGAACCTTCAAAGTGGAAGGAGTTAAAAGGAGGTCAGGACTTTTTTGTTCAGATGCTGAGGGCAAGAAATGTTCTGTCGGTCAGAAAACATGCAGAACCAAACAGTGGATCATCATCCAAGAAGGGGAAGATGCATCCTGCCATGTATGAGGATCCTGTTTCTCTCGGTCACCAAGGTACAGTGAATTTGAGACGTAGTGAAAGGCTGCCTATCACTGTCAAATTGCACGGTATGGAATCAGAAAAATGTCCTCTGAAGAAAACAACTGGCAAACCAGATGCTGTGATCGAAAAGAAAAAATCAACTGCCAAAGTAGATGTGACTGAAAAGAAAAAATATGAGCCACTGAGCAATGATTCTCGTGAAAAGGTTGTTTCTGTTGGTCGTCTTTTCCAAGTGGAAGTCCCGCAATGGACTGGTGTAGTTTATGAGAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTGTTAAAGATGATTCAAAACCTTCTACAGAAACAGATCTTGTTGGAAGAGAAAGACGAGGAAAGTGTAGCTGCAATATTCAAGGTTCTGTTGACTGTGTCAGATTTCATATTGCTGATAACAGGATGAAACTGAAGTTTGAATTGGGTTCTGCATTTTACCATTGGGGATTTGATAAAATGGGCGAGGAAGTTTCACTTCAATGGACAGCTGATGAAGAAAAGAGATTTAAGGATGCAATGAGTTTAAAAATCCCCTCCCAAAACGAGTCTTTTTGGAACAATCCGTCCATATACTTTCAAAAGAAGACAAGAAAAGACATGCTGAGATATTACTTCAATGTATATCTTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCGAAGACTGTTGACAGCGATGATGACGAAGTCGAATTTGGATCTTTTGGTGATGGTTTTGGGATGAAAGCTATCAAGCGTCCATCAACGGAATTCATGGAGTGTTCAGAGAACAAGCAATGCTTTGATTTTAAGTAG 1818 0.4015 MANGSSFDRHEGETFTEFHGNGGCLVEDRIDNADHDKAKQKSLFCQFFSVYLKENCSRGNVRPVPVMLGDGQLLDLYQLFSLVKEKGGYDAVSRKGMWDSVIDELGLDLRVLPSVKLVFGKYLSGFDGWLSKTFEEKSFKSGNHGYLNSLPIDLEKEFRSLLCSNLKDKDDDFVPLESSDIIKHLDLVNHKSDGYLLDNINQNNKSEGVQNVNSDGNGGENEKFGTGIKDDLTASCAETSEKEFNSRKRKRESLSGMVNWTRNIAKHPFDPVAQPLPEPSKWKELKGGQDFFVQMLRARNVLSVRKHAEPNSGSSSKKGKMHPAMYEDPVSLGHQGTVNLRRSERLPITVKLHGMESEKCPLKKTTGKPDAVIEKKKSTAKVDVTEKKKYEPLSNDSREKVVSVGRLFQVEVPQWTGVVYESDSKWLGTQVWPVKDDSKPSTETDLVGRERRGKCSCNIQGSVDCVRFHIADNRMKLKFELGSAFYHWGFDKMGEEVSLQWTADEEKRFKDAMSLKIPSQNESFWNNPSIYFQKKTRKDMLRYYFNVYLIQLRSYQNRVTPKTVDSDDDEVEFGSFGDGFGMKAIKRPSTEFMECSENKQCFDFK* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2285 605 Pfam ARID/BRIGHT DNA binding domain 50 126 IPR001606 GO:0003677
Mal1g2285 605 SUPERFAMILY ARID-like 46 133 IPR036431 GO:0003677
Mal1g2285 605 SMART ARID_2 35 127 - -
Mal1g2285 605 MobiDBLite consensus disorder prediction 206 220 - -
Mal1g2285 605 ProSiteProfiles ARID domain profile. 38 131 IPR001606 GO:0003677
Mal1g2285 605 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 13 604 - -
Mal1g2285 605 MobiDBLite consensus disorder prediction 206 227 - -
Mal1g2285 605 MobiDBLite consensus disorder prediction 305 330 - -
Mal1g2285 605 CDD ARID 57 127 - -
Mal1g2285 605 Gene3D - 27 141 IPR036431 GO:0003677
Mal1g2285 605 SMART bright_3 39 132 IPR001606 GO:0003677
Mal1g2285 605 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 13 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2285 Mal-Chr1 30364158 30366908 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal1g2285 ARID 4.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2285 - - mtr:MTR_1g073530 924.08