Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2264 ATGGTAAAAGCAATAGTATCTGTGCTGTTGATTGCCTCTATCCTCTTATGTGTCGGCGTATCTGGAACAGATAATGAATTTCCTAGATGTAATTGTGATGATGAGACCAGTTTATGGACTATTGAGAGCATTTTGGAGTGTCAAAGAGTTGGAGATTTCTTGATTGCTGTGGCCTACTTCTCAATCCCTATTGAGCTGCTTTACTTCGTTAGTTGCTCGAACGTCCCTTTCAAATGGGTCCTTGTTCAGTTCATTGCCTTTATAGTACTATGTGGATTGACACATTTGCTGAATGGTTGGACTTATGGTCCTCACACTTTTCAGCTTATGGTTGCACTTACCATCTTTAAGATTCTCACTGCCTTGGTGTCTTGTGCAACTGCGATAACGCTTGTCACTTTAATTCCTTTACTTCTCAAAGTGAAGGTCAGGGAATTCATGCTCAAGAAAAAGACATGGGATCTTGGACGCGAGGTTGGTCTTATTATGAAGCAAAAGGAGGCTGCAATGCATGTAAGAATGCTTACTCAAGAGATTCGCAAGTCACTTGATAGACATACAATTTTGTATACTACTTTGGTGGAGCTGTCTAAAACACTAGGCTTGCAATATTGTGCTGTGTGGATGCCAAATGAAGAAAAGACAGTGATGAATCTCACTCATGAATTGAACGCAAGGAATTTAGATATTTCTTTACCGATTACTGATCCAGATGTTGTAAGAATTAAGGGAAGCAATGGAGTGAATATACTTAACTCTGACTCAGCGCTTGCTGTTTCCAGTTGTGGTGTTTCTGGTGAGGCCGGACCAGTTGCTGCAATTCGAATGCCAATGTTACGTGTTTGTAATTTCAAAGGAGGAACACCTGAGCTAACTCAGGCTTGTTATGCAATATTGGTCTTGATTCTCCCGGCTGGAGAGCCTAGATCTTGGAGCAATCAGGAGCTGGAGATAATTAAGGTGGTTGCTGATCAGGTCGCCGTGGCTCTATCGCATGCTGCAATTCTTGAAGATTCTCAACTTATGAGAGAGAAGTTGGAAGAGCGCAATCGTGCTTTGCAACTGGCACGAAGGAATGCTATGATGGCAAGCCAGGCAAGAAACTCATTTCAGAAAGTCATGAGCGATGGTATGAGGAGGCCTATGCACTCAATTTTGGGATTGCTTTCAATGATACAAGACGATAATTTAAAGAATGAACAGAAGCTTATTGTGGATGCAATGTTAAGGACGAGCAATGTCCTATCAAACTTGATAAATGATGCCATGGACAGCTCTGCAAAGGATGATGGAAGATTTCCTTTGGAGATAAGGTCTTTTGGGTTACATTCCATGATAAAAGAAGCAGCGTGCCTTGCCAAATGCATGTGTGTTTATAAAGGCTTGGGTTTTGTGGTTGAGGTCGATAAGGCTTTACCAAACAATGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTTTGCATATGGTTGGGAATCTACTGGATTGTAACCATGGGGAAGGCGGGATCCTAGTATTTCGGGTTTCGGCAGATGCTGGAAGTCAAGGAAGGAATGACAAAGGATGGGCAACCTGGAGACCAAGCTCGTCTAGCGGTGATGTAAATATTAGATTTGAGATAGGGATCAACAGTAGCGATTCTGAAGTTGGGAGCTCAGTTTCCTCGGGTCCCGGGGGTAGGACATATACCAGTGATAGATATGAAGGCAGGTTGAGCTTTAGTATTTGCAAGAGGATAGTCCAGCTGATGCAAGGAAACTTATGGTTGGTACCATATACTCACGGTATTCCTCAAAGCATGACACTTCTTCTTCGGTTTCAATTAAGGCCATCCATTGCAATAGCCATCTCTGAACCCGGAGAATCATCAGAACGCAACTATTCCAATTCAATGCTGAGAGGTCTGCAAGTTCTGTTGGTTGACAACGACGATGTAAATAGAGCAGTGACACAAAAACTGCTTCAGAAATTAGGTTGTTCCGTGACTTCCGCTTCTACAGGATTCGAATGCCTTACCGTCATTGGACCTGTCGGATCTTCCATCGAAGTCATTCTTTTGGATCTCCAAATGCCTGATATCGATGGCTTCGAAGTCGCGGCAAGGATTCGGAAGTTTAAAAGTGGAAATAGGCCTATAATCGTTGCTTTGACTGCAAGTGCAGAAGAAGATTTGTGGGAAAGGTGTATGCAGATTGGTGTTAATGGAGTAATCCGAAAACCGGTTTTGATGCAAGGAATTGCTAGTGAACTCAGAAGAATACTAATGCAGGGAAATCTCTGA 2283 0.4271 MVKAIVSVLLIASILLCVGVSGTDNEFPRCNCDDETSLWTIESILECQRVGDFLIAVAYFSIPIELLYFVSCSNVPFKWVLVQFIAFIVLCGLTHLLNGWTYGPHTFQLMVALTIFKILTALVSCATAITLVTLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQYCAVWMPNEEKTVMNLTHELNARNLDISLPITDPDVVRIKGSNGVNILNSDSALAVSSCGVSGEAGPVAAIRMPMLRVCNFKGGTPELTQACYAILVLILPAGEPRSWSNQELEIIKVVADQVAVALSHAAILEDSQLMREKLEERNRALQLARRNAMMASQARNSFQKVMSDGMRRPMHSILGLLSMIQDDNLKNEQKLIVDAMLRTSNVLSNLINDAMDSSAKDDGRFPLEIRSFGLHSMIKEAACLAKCMCVYKGLGFVVEVDKALPNNVMGDERRVFQVILHMVGNLLDCNHGEGGILVFRVSADAGSQGRNDKGWATWRPSSSSGDVNIRFEIGINSSDSEVGSSVSSGPGGRTYTSDRYEGRLSFSICKRIVQLMQGNLWLVPYTHGIPQSMTLLLRFQLRPSIAIAISEPGESSERNYSNSMLRGLQVLLVDNDDVNRAVTQKLLQKLGCSVTSASTGFECLTVIGPVGSSIEVILLDLQMPDIDGFEVAARIRKFKSGNRPIIVALTASAEEDLWERCMQIGVNGVIRKPVLMQGIASELRRILMQGNL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2264 760 ProSiteProfiles Response regulatory domain profile. 637 755 IPR001789 GO:0000160
Mal1g2264 760 Gene3D - 163 331 IPR029016 -
Mal1g2264 760 PANTHER ETHYLENE RESPONSE SENSOR 2 13 759 - -
Mal1g2264 760 SUPERFAMILY CheY-like 633 755 IPR011006 -
Mal1g2264 760 Coils Coil 336 363 - -
Mal1g2264 760 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 351 432 IPR036097 GO:0000155|GO:0007165
Mal1g2264 760 SUPERFAMILY GAF domain-like 187 333 - -
Mal1g2264 760 Pfam Response regulator receiver domain 638 747 IPR001789 GO:0000160
Mal1g2264 760 Pfam His Kinase A (phospho-acceptor) domain 367 430 IPR003661 GO:0000155|GO:0007165
Mal1g2264 760 Pfam GAF domain 184 330 IPR003018 GO:0005515
Mal1g2264 760 SMART REC_2 636 755 IPR001789 GO:0000160
Mal1g2264 760 CDD HisKA 364 426 IPR003661 GO:0000155|GO:0007165
Mal1g2264 760 PIRSF Ethylen_sen_hybr_HK 1 760 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mal1g2264 760 Gene3D - 332 429 - -
Mal1g2264 760 Gene3D - 636 759 - -
Mal1g2264 760 SMART HisKA_10 366 431 IPR003661 GO:0000155|GO:0007165
Mal1g2264 760 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 593 IPR036890 -
Mal1g2264 760 Gene3D - 430 608 IPR036890 -
Mal1g2264 760 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 594 IPR003594 -
Mal1g2264 760 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 13 759 - -
Mal1g2264 760 CDD HATPase_ETR2_ERS2-EIN4-like 472 605 - -
Mal1g2264 760 SMART gaf_1 184 340 IPR003018 GO:0005515
Mal1g2264 760 CDD REC_ETR-like 636 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2264 Mal-Chr1 30096352 30099245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2264 20 755 Miscellaneous Gene Families AT3G04580 58.133 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g2264 HATPase_c 2e-06 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2264 K14509 - gmx:100787425 1271.14