Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2263 ATGGACAAAATCAATTATGAAGCAGATGAACGAAGAAGAACAAGGAGCGAAACAGACGAACACGAGAAGGAATCTAACTGTAACAATCAACACAAGAACAACACGATCACTGATGAGTCTTCCAAACACAACGAACGATTAATCGCGAAGAAAGTAGAGGAGGTTGAAGGTGATGGGTTTGACAGCCGGGGTCGCCGGAACGGCAATGCTCGCGGTGGCATTGGTCTAAACAAACACCACAATACAAACCTAACAATCAACGAAAATCGCGATGAAGAAGAAGAAGATGATGATAACAGAGATGAACCTAGAGAAGGTGCAGTTGAAGTTGGTAACAGAAGACCAAGAGGAAGACCACCTGGATCCAAAAACAGACCAAAACCACCCATCTTTGTAACAAGAGATAGTCCAAATGCTTTGAAGAGTCATGTCATGGAGGTAGCTGGTGGAGCTGATATAGCGGAAAGTGTAGCGCAATTCGCAAGAAGGCGTCAACGCGGTGTTTGTGTTCTCAGTGGAAGTGGCTCTGTAGCTAATGTTACTCTTAGACAACCTTCAGCTCCTGGTGCTGTTGTAGTACTTCATGGTAGGTTTGAGATTTTGTCTTTAACTGGGACGTTTCTACCTGGTCCTGCTCCACCAGGTTCAACTGGTCTTACAGTATACCTGGCTGGAGGTCAGGGCCAGGTAGTTGGAGGTTGTGTTGTTGGAACCCTTGTTGCAGTTGGACCTGTTATGCTTATTGCTGCTACTTTTACTAATGCAACTTATGAAAGACTTCCACTTGATGAGGATGATAATGATAATAATGACGGGCCTAGCTCAGCAGGCGGTGTGCAAGGTGGAGGCGCGTCTGGTGGATCGCCTCCACCGGGAATTGGTCATCAGTTGCAAGGTGGGCTTCCAGATCCTTCTTCTATGCCTTTGTATAATTTGCCACCAAATTTGTTGCCTAATAATGGAGGGCAGATGGGACATGAGGCTCTTGCTTGGGCTGCTGCTCATGGAAGGCCACCTTATTGA 1023 0.4633 MDKINYEADERRRTRSETDEHEKESNCNNQHKNNTITDESSKHNERLIAKKVEEVEGDGFDSRGRRNGNARGGIGLNKHHNTNLTINENRDEEEEDDDNRDEPREGAVEVGNRRPRGRPPGSKNRPKPPIFVTRDSPNALKSHVMEVAGGADIAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVVLHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVVGGCVVGTLVAVGPVMLIAATFTNATYERLPLDEDDNDNNDGPSSAGGVQGGGASGGSPPPGIGHQLQGGLPDPSSMPLYNLPPNLLPNNGGQMGHEALAWAAAHGRPPY* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2263 340 Gene3D - 141 268 - -
Mal1g2263 340 MobiDBLite consensus disorder prediction 1 137 - -
Mal1g2263 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 76 340 IPR014476 GO:0003680
Mal1g2263 340 CDD DUF296 141 224 IPR005175 -
Mal1g2263 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 254 IPR005175 -
Mal1g2263 340 ProSiteProfiles PPC domain profile profile. 137 274 IPR005175 -
Mal1g2263 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 265 - -
Mal1g2263 340 MobiDBLite consensus disorder prediction 36 65 - -
Mal1g2263 340 MobiDBLite consensus disorder prediction 1 28 - -
Mal1g2263 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 76 340 - -
Mal1g2263 340 MobiDBLite consensus disorder prediction 261 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2263 Mal-Chr1 30057775 30062290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2263 77 340 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 63.838 3.35e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2263 - - var:108341460 322.783