Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2251 ATGGGTACCTCGAATCTTTGCTTCTTTTTCTTTTCTCTGGTGAGTTTGTGTACTATGGCGGCTGCTAAGGTGGTGCTGATTGGGAACAACATCACTCTCTCGTTTGATGATATTGAAGCTAATTTCGCTCCGTCGGTCAAAGGTTCTGGAGAATATGGAGCCTTATTCTTGGCAGAGCCGCTTGATGCATGTACAGAACTTACAAATAAAGCTAGACAACTTTCGAATGCTAGTTCACCTTTTGTTTTGATGGTTAGAGGAGGGTGTAGCTTTGAGGACAAGGTTAGGATTGCACAAAATGCTGGCTACAAAGCTGCAATTGTCTATGACAATGAAGATGGTGGCATCTTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATACATGCGGTATTTGTTTCAAAAGCTTCGGGTGAAATACTACAGAAATACACTGGTTTAACTAATGTGGAAACATGGCTCATTCCAACTTTCGAAAATTCAGCATGGTCTATCATGGCAATTTCGTTTATTTCCTTGCTAGCTATGTCTGCAGTGCTGGCCACTTGTTTCTTCGTCCGCAGGCATCGGATACGAAGAGAAAGGCCTCGAACTTCTCATGTTCGTGAATTTCATGGCATGAGTAGTCGCCTAGTTAAAGCAATGCCAAGTTTGATTTTTACTTCTGCTTTGGAAGATAACTGTACATCAAGAACATGTGCTATCTGCCTTGAAGACTATTGCGTTGGAGAGAAGCTCAGGATTCTGCCCTGCTGTCACAAGTTTCATGCTGCCTGTGTGGATTCTTGGCTTACTTCGTGGAGAACCTTTTGCCCAGTTTGCAAGCGTGATGCAAGAACGGGTCTGGCTGATCCACCACCTTCAGAATCCACACCTCTGCTGTCATCAACCCCGTCATCTGTGGCATCGTCTTTTGTGTCTTCTATGAGGTCATCATTTGCTTCATCTTCAGCAATACAAATTGGTTCACAGTCGCAATCTGTTTCTCGTAACCACTCTTTAGCAAGTACCCCTTACAATCAGCCATCTCTAAGGTCCTACCGACAATCCCCCTCTCTAAGCATCAGCCGTAGCTCTGTGGATCTTAGGAATGCATCCCAAAGATCTCTAGCTTCGCACATGAATTCACCACGTTCCATCGGTTATCCATCTTTGTCATCTCTTAACTCAAGGTACTTGCCTTCACATATTCCAAGTCCAAGCAATGCTTCAGTAAGTTTCCTTGGTTCATCCAGTCATCAGCAGCATCCACTCCGTTATAGTGAGTCAGCCTCAAGCTTCTCACCATTTGCGTCTGCCAACTCCCTTCCGGACTGTTGA 1323 0.4452 MGTSNLCFFFFSLVSLCTMAAAKVVLIGNNITLSFDDIEANFAPSVKGSGEYGALFLAEPLDACTELTNKARQLSNASSPFVLMVRGGCSFEDKVRIAQNAGYKAAIVYDNEDGGILVAMAGNSAGIRIHAVFVSKASGEILQKYTGLTNVETWLIPTFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRTSHVREFHGMSSRLVKAMPSLIFTSALEDNCTSRTCAICLEDYCVGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLADPPPSESTPLLSSTPSSVASSFVSSMRSSFASSSAIQIGSQSQSVSRNHSLASTPYNQPSLRSYRQSPSLSISRSSVDLRNASQRSLASHMNSPRSIGYPSLSSLNSRYLPSHIPSPSNASVSFLGSSSHQQHPLRYSESASSFSPFASANSLPDC* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2251 440 CDD PA_C_RZF_like 13 163 IPR044744 -
Mal1g2251 440 Pfam Ring finger domain 233 276 IPR001841 -
Mal1g2251 440 SUPERFAMILY PA domain 80 143 IPR046450 -
Mal1g2251 440 ProSiteProfiles Zinc finger RING-type profile. 234 276 IPR001841 -
Mal1g2251 440 Gene3D - 20 155 - -
Mal1g2251 440 Pfam PA domain 75 142 IPR003137 -
Mal1g2251 440 CDD mRING-H2-C3H2C2D_ZSWM2 233 276 - -
Mal1g2251 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 281 IPR013083 -
Mal1g2251 440 MobiDBLite consensus disorder prediction 419 440 - -
Mal1g2251 440 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 367 - -
Mal1g2251 440 SMART ring_2 234 275 IPR001841 -
Mal1g2251 440 MobiDBLite consensus disorder prediction 328 381 - -
Mal1g2251 440 SUPERFAMILY RING/U-box 223 287 - -
Mal1g2251 440 PANTHER PROTEASE-ASSOCIATED (PA) RING/U-BOX ZINC FINGER PROTEIN 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2251 Mal-Chr1 29760280 29764450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2251 21 439 C3H Transcription Factor Family AT1G22670 47.991 2.52e-115 343