Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2228 ATGGAGGAGACAAAGTTCTGTGCTTTAGCTTTCATTTCTGGGTTCTTTTTGTTGTTGCTTCATCCATTATGGCTGGTTTCTGCTAACATGGAAGGTGATGCTTTACATAACTTGAGGACAAATTTACAAGATCCTAACAATGTTTTGCAGAGTTGGGATCCTACACTTGTTAATCCTTGCACATGGTTTCATGTAACCTGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGAAATGCTGCTTTATCTGGCACACTAGTTCCACAGCTCGGGCAACTCAAGAATTTGCAGTATCTGGAACTTTACAGCAATAACATCACTGGTCCTATTCCAAGTGACCTGGGGAATCTTACTAACCTGGTGAGCTTGGATCTGTACCTAAATCGGTTCAATGGCCCTATCCCGGATTCTTTGGGCAAGTTGTCAAAATTGCGTTTCCTCCGGCTTAATAACAACAGCTTGATGGGTCCTATTCCCATGTCACTGACCAATATTTCAGCTCTCCAAGTTCTGGACTTGTCTAATAACCAGCTCTCAGGTGTGGTTCCTGATAATGGCTCCTTTTCGTTATTCACTCCTATCAGTTTTGCCAACAACTTGAATCTATGTGGACCTGTTACCAGTCGCCCTTGTCCAGGCTCTCCCCCATTTTCTCCACCTCCCCCATTTGTCCCTCCACCTCCAATTTCTGCCCCAGGAAGTGGCAGTGCTACTGGAGCAATAGCTGGAGGAGTTGCTGCCGGTGCTGCTCTATTATTTGCCGCGCCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTTTGATGTTCCTGCTGAAGAGGATCCTGAAGTTCATCTTGGGCAGCTTAAGAGGTTCTCACTACGAGAGTTGCAAGTTGCAACCGATACTTTCAGCAATAAGAACATTCTTGGAAGAGGAGGTTTTGGCAAGGTGTACAAAGGACGTTTGGCAGATGGTTCACTGGTTGCTGTCAAAAGATTGAAAGAGGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTGCATAGAAATCTCCTCCGTTTACGCGGGTTTTGTATGACACCAACAGAAAGGTTACTTGTTTATCCCTACATGGCTAATGGAAGCGTTGCCTCTTGTTTAAGAGAGCGTCCTCCACATCAAGAACCACTAGATTGGCCAACAAGGAAAAGAATAGCTTTGGGATCAGCAAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAAATCATTCATCGTGACGTGAAAGCTGCTAACATATTGTTGGATGAAGAGTTTGAGGCTGTTGTGGGGGATTTTGGATTGGCAAAACTTATGGATTACAAGGACACCCATGTTACAACTGCTGTTCGGGGGACTATCGGGCATATAGCTCCCGAGTACCTATCTACTGGAAAATCTTCAGAGAAAACTGATGTTTTTGGTTATGGTATCATGCTTCTTGAGTTGATAACCGGACAAAGAGCTTTTGACCTCGCTCGTCTTGCGAATGATGATGATGTTATGCTGCTTGATTGGGTGAAAGGACTTCTGAAAGAGAAAAAGCTTGAAATGTTGGTTGATCCTGATCTTCAAACCAACTACATAGAAGCTGAGGTAGAGCAGTTAATCCAGGTTGCACTGCTCTGCACGCAAGGCTCGCCTATGGACAGACCAAAGATGTCAGATGTAGTGAGAATGCTTGAAGGCGATGGCTTAGCAGAAAGATGGGATGAGTGGCAAAAAGGGGAAGTTCTACGCCAGGAAGTGGAACTGGCGCCTCATCCGAATTCTGATTGGATTGTTGACTCTACTGAAAATCTACATGCAGTTGAATTATCTGGTCCAAGGTGA 1884 0.4475 MEETKFCALAFISGFFLLLLHPLWLVSANMEGDALHNLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNRFNGPIPDSLGKLSKLRFLRLNNNSLMGPIPMSLTNISALQVLDLSNNQLSGVVPDNGSFSLFTPISFANNLNLCGPVTSRPCPGSPPFSPPPPFVPPPPISAPGSGSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKGEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2228 627 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mal1g2228 627 SUPERFAMILY L domain-like 32 200 - -
Mal1g2228 627 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Mal1g2228 627 CDD STK_BAK1_like 310 581 - -
Mal1g2228 627 SMART serkin_6 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2228 627 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Mal1g2228 627 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Mal1g2228 627 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 16 627 IPR031048 GO:0004675|GO:0005102|GO:0006468
Mal1g2228 627 Pfam Protein kinase domain 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2228 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mal1g2228 627 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
Mal1g2228 627 SUPERFAMILY Protein kinase-like (PK-like) 283 579 IPR011009 -
Mal1g2228 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 627 - -
Mal1g2228 627 ProSiteProfiles Protein kinase domain profile. 304 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2228 Mal-Chr1 29430585 29434558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2228 3 627 Receptor kinase-like Gene Family AT1G71830 88.640 0.0 1044
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal1g2228 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2228 K13418 - gmx:100789884 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2228 1 29430585 29434558 Mal1g2228 1 29430585 29434558 ECH