Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2226 ATGGGAAAATATGCAGCTGAAATTAGGAACCCATATACCAAAGAGAGACATTGGTTAGGCACATTTAACACTGCAGAAGAAGCTGCAGTGGCCTATGATATTTCATCTATTAAGATATGTGGTATTCATAATGCTAGAACTAATTTTCATTACCCTTTTATATCTCATCCACAACAACCTCCTTTGTCATTACTTCCTGCACCCCCACCATCCACCCCAGAGTTGGATGCAAGTAATCCAGAGATGAATGTTGCTTTTGATGGTGATGATGAATCTATGGTTATTGCTTCTATCTTGCAAAGTTTTTCTAATTCTGGTAGTTGTTCTTTATAG 333 0.3754 MGKYAAEIRNPYTKERHWLGTFNTAEEAAVAYDISSIKICGIHNARTNFHYPFISHPQQPPLSLLPAPPPSTPELDASNPEMNVAFDGDDESMVIASILQSFSNSGSCSL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2226 110 MobiDBLite consensus disorder prediction 60 81 - -
Mal1g2226 110 MobiDBLite consensus disorder prediction 60 75 - -
Mal1g2226 110 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF088 2 101 - -
Mal1g2226 110 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 101 - -
Mal1g2226 110 SMART rav1_2 2 56 IPR001471 GO:0003700|GO:0006355
Mal1g2226 110 Gene3D AP2/ERF domain 1 51 IPR036955 GO:0003700|GO:0006355
Mal1g2226 110 CDD AP2 2 49 IPR001471 GO:0003700|GO:0006355
Mal1g2226 110 ProSiteProfiles AP2/ERF domain profile. 1 50 IPR001471 GO:0003700|GO:0006355
Mal1g2226 110 SUPERFAMILY DNA-binding domain 2 51 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2226 Mal-Chr1 29408444 29408776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2226 2 59 AP2-EREBP Transcription Factor Family AT1G12890 62.903 2.72e-19 77.4