LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g2224	ATGATGGAGGTTCACATCTTACTATTATTCGCCACTCTATTCTTAATCATAATCCGATTCTTCCTAAACCGCAAAAAGAATAAACCACCCGGTCCAACCGGTCTACCCATAATCGGAAACCTCCACCAACTCGGCCCAAAACCCCACTGTACCCTCTCTTCCCTCGCCAAAACCTACGGTCCCCTCATGTCCCTCCGTTTCGGCTCCGTCACCGTCACCGTCGCTTCTTCCCCTACAACCGCCCAAGAAATCCTCCAAAAAAAGGACCAATCCTTCGCCAACCGCCCTATCTCTGAATCAGTCGCCGCTCAACCCAACGTCAACGACACACTCGCATGGTCCCCTGCTGACTCACGGTGGCGCAACCGTCGCCGTATCTGCACCACCCAAATATTCACCTCCCACCGCCTCGATCTTCTTCAACACCTCCGTCACCGGAAAGTTGAGCAACTAGTCCAACACCTTCATAAAAAAGCTGCAGAAAAAACAACCGTCGACATAGGTGAACTTGCTTTTGCCACCATGTTGAACCTGGTTTCTAACACGGTGTTCTCAGAGGACCTCGTTGATTCGGAGTTCGAAAGTGCTGGTGAGTTTAAGGAGCTTGTGTGGAGGATAATGGAGGATGCTGGGAAAGTGAATATTTCTGATTATTTTCCAGTGGTGAAGAGATTTGATTTGCAGGGTGTGAAGAGACATGTTAAGGTTTCTTATGTGAGATTGCATGAGATTTTTGATCGTATGATTCTGAAACGTGTTGAAGATAGAAAGAGTTCGAGTGGTGGTGTTGTTGGTGGTGATTTTTTGGATGTTTTGCTTGATCATTGTCAACAAGAGGATGACTCTGTTTTTAGTGTTGAAAGCATCAAGCCGTTGATTCTGGATTTATTTATAGCTGGAAGTGACACATCAGGATCAACAACAGAATGGGCAATGGCAGAGCTTCTCCATAATCCAAAAATAATGAAAAAAGCAAGAAATGAAGTGATTCAAGTAATTACCAAATCCAAGCAAGTCAAAGAATCAGATATTCCATCACTTCCTTACATCCAAGCAATAGTAAAAGAAACACTTAGACTTCATCCACCTGTACCACTTCTCTTACCTTATATTGCATCAAATGATGTTGAAATCAATGGTTACACAATTCACAAAGGAAACCAAGTTTTAATAAATGCATGGTCTATTGGAAGAAACCCTGAGTTTTGGGATGATCCATTGGTTTTTAAACCTGAGAGGTTTCTGAATTCCAATGTTGATTTTAAAGGAAGAGATTTTGAGTATTTGCCTTTTGGTGCTGGAAGGAGAATTTGTCCTGGTATTCCACTTGCTAATAGAATGATTGTTTTGATGTTGGCTGTGTTGTTGCATTCTTTTGAATGGGAGCTTCCTCAAGGTGTTACTCCTGAAACGTTAGACATGAATGAGCACTATGGAATCACGTTAAAGAAGCTTATTCCCCTTTCAGCTGTTCCTATTTCGGTAGTAGTATGA	1494	0.4277	MMEVHILLLFATLFLIIIRFFLNRKKNKPPGPTGLPIIGNLHQLGPKPHCTLSSLAKTYGPLMSLRFGSVTVTVASSPTTAQEILQKKDQSFANRPISESVAAQPNVNDTLAWSPADSRWRNRRRICTTQIFTSHRLDLLQHLRHRKVEQLVQHLHKKAAEKTTVDIGELAFATMLNLVSNTVFSEDLVDSEFESAGEFKELVWRIMEDAGKVNISDYFPVVKRFDLQGVKRHVKVSYVRLHEIFDRMILKRVEDRKSSSGGVVGGDFLDVLLDHCQQEDDSVFSVESIKPLILDLFIAGSDTSGSTTEWAMAELLHNPKIMKKARNEVIQVITKSKQVKESDIPSLPYIQAIVKETLRLHPPVPLLLPYIASNDVEINGYTIHKGNQVLINAWSIGRNPEFWDDPLVFKPERFLNSNVDFKGRDFEYLPFGAGRRICPGIPLANRMIVLMLAVLLHSFEWELPQGVTPETLDMNEHYGITLKKLIPLSAVPISVVV*	498

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal1g2224	497	Gene3D	Cytochrome P450	19	487	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	P450 superfamily signature	299	316	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	P450 superfamily signature	352	363	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	P450 superfamily signature	429	438	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	E-class P450 group I signature	80	101	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	E-class P450 group I signature	428	438	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	E-class P450 group I signature	438	461	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	E-class P450 group I signature	174	192	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	E-class P450 group I signature	308	334	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Mal1g2224	497	PRINTS	E-class P450 group I signature	288	305	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Showing 1 to 10 of 18 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g2224	Mal-Chr1	29386488	29389202	Tandem

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g2224	23	493	Cytochrome P450	AT2G45550	43.882	7.43e-146	426

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g2224	-		-	vra:106769993	733.791

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g2224	1	29386488	29389202	Mal6g0372	6	4954843	4956746	ECH
	Mal1g2224	1	29386488	29389202	Mal1g2224	1	29386488	29389202	ECH

Showing 1 to 2 of 2 entries

Previous1Next