Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2218 ATGGGTGCGGTTTCGGAATCTGCTTCTGCTGATTGTTTCAGTGAGGTGATGTCGTCGATGCCCGGTTTTCGGTTCCATCCCACAGATGAGGAGTTGGTTATGTATTATCTGAAACGGAAGATTTGTGGGAAGAAGTTGAAGTACAACGTGATTTGTGAAACTGATGTGTACAAGTGGGATCCTGAGGATTTGCCTGGACAATCTTTCCTTAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCATAGAGATAGGAAGTATCCTAATGGTGGAAGGTCTAACCGAGCAACTAGACATGGCTACTGGAAAGCTACTGGAAAAGATCGAAATGTTATATTCAATTCTCGGTCAGTTGGAGTGAAAAAGACCCTTGTTTTCTATATCGGCAGAGCTCCTAATGGTGAAAGAACTGATTGGGTTATGCATGAATACACCATGGATGAAGAGGAGTTTAAGAGATGCCGTGATGTTAAGGACTATTATGCACTTTACAAGGTTTTCAAGAAGAGTGGACCGGGTCCTAAGAACGGTGAACAATATGGTGCACCATTTAAAGAAGAAGAATGGGCAGATGACGATGTTGTAGATTTTAATGTAAATTCTGTTGAGCGGGAGGTTCCAAATGCTGTTATTAACAATAATAATATTGATCAGCTGCAGCCATTATTTGATGATGAAATTGATGAACTCATTAAAGGGATGTTTGATGTTGAGCCTGTCCTTGACCAGCAAAATGTGAATGGTTATGCTGACTTTCCTCAGGTTGTTCATGAAGAAACACGAAATAGGGTCATGGATCAATTCTACGAGGCCATGATATTCCCTGATCCAAGTGAAAAAATGCAATCTAGCAGTCAGCTTTATGATGAGCAGCCCAGCTTTGACTTCAATCATCAGTCCGTTACTTCTCACTTGTGTATTTCTGAAGCCCCTGAGGTCACTTCTGCTCCAAACATTCAAAGCGAGGAGGAGCTTGTCTTTCACGAGGAAGGCTTCTTGGAAATTAATGATCTCATTGATAATGAACCTACATTTTCAAATACGGAAAACCTTAACAACGATCTCATTGAGAACCTCCACTTTGAAGATGTGTTAAGTGAATTTGATCCTTACCAAGATGCAGAGATGTTTCTTTCTGGCCTGGGATCTATTAACGACGAAACAGTTTCACATGCATATATGAATAACGTTGGCAGCAATATTGAAAATCAGAGTTACCAGTTGCTGTCCAATCCAGAAGACGCAAATCAAACTGTTGATGAATTCTGGATGCATGTTGAAAGAAACACCCGCAGTCCAGCAGAAGGCTATGATGGTTCTTTCTCTCTAACAAATCCAGGTGTTGTGTGTGACTCTGTCGGCTTTCCTACTGAAAGCACTGAAAATCAAAGAAGCACTGTCGAAGATGGTAAAACAAGTAGATTCTCCTCTGCTCTATGGGCCTTTGTTGATTCAATACCTACCACTCCTGCATCAGCTGCTGAAAATCCTTTGGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCAGGGTGAAGATCAAGCCCACTGACAACAACATTGCTGCAGGTAATAATGACACTGCAACTATGAAGAGAGCAGGCAGAAAGGGAGTCTCATTCCTTTTCTTCCCGATTCTTATTGCTTTATGTGCTTTCTTGTGGGTTTCTATTGGAAATTTAAGACTATTAGGGAGGTACGTCTCCCCTTGA 1713 0.4145 MGAVSESASADCFSEVMSSMPGFRFHPTDEELVMYYLKRKICGKKLKYNVICETDVYKWDPEDLPGQSFLKTGDRQWFFFCHRDRKYPNGGRSNRATRHGYWKATGKDRNVIFNSRSVGVKKTLVFYIGRAPNGERTDWVMHEYTMDEEEFKRCRDVKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWADDDVVDFNVNSVEREVPNAVINNNNIDQLQPLFDDEIDELIKGMFDVEPVLDQQNVNGYADFPQVVHEETRNRVMDQFYEAMIFPDPSEKMQSSSQLYDEQPSFDFNHQSVTSHLCISEAPEVTSAPNIQSEEELVFHEEGFLEINDLIDNEPTFSNTENLNNDLIENLHFEDVLSEFDPYQDAEMFLSGLGSINDETVSHAYMNNVGSNIENQSYQLLSNPEDANQTVDEFWMHVERNTRSPAEGYDGSFSLTNPGVVCDSVGFPTESTENQRSTVEDGKTSRFSSALWAFVDSIPTTPASAAENPLVNRALNRMSSFSRVKIKPTDNNIAAGNNDTATMKRAGRKGVSFLFFPILIALCAFLWVSIGNLRLLGRYVSP* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2218 570 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Mal1g2218 570 PANTHER NAC TRANSCRIPTION FACTORS 2 15 569 - -
Mal1g2218 570 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Mal1g2218 570 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Mal1g2218 570 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Mal1g2218 570 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2218 Mal-Chr1 29322842 29326590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2218 4 566 NAC Transcription Factor Family AT1G34190 43.266 5.16e-141 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g2218 NAM 8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2218 - - mtr:MTR_1g097300 1066.6