Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2208 ATGGAAAATATTAGTGTTACCTCTTTGTTCTTTTGCTTACTCTTTTTTAGCATAACAAAGATACAAGTAACTTCTCTTTCACCTGATGGACAAGCACTTCTTTCTCTTGTACCATCATCACCTTCTCTTCTCTCTTCATGGAACCATTCAATCTCAACACCATGTTCATGGAAAGGCATAACTTGTTCACCACAGTCTAGAGTAATTTCTCTTTCTATCCCTGATACTTTCCTCAACCTTACTTCTCTACCACCTCAACTATCCTCTTTAACAATGCTTCAGCTTCTCAACCTCTCTTCAACCAATCTCTCTGGCTCAATCCCACCTTCTTTTGGTCAACTCTCTCATCTTCAACTCCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATTCCTAATCAACTTGGAAACCTCTCTTCACTTCAGTTCCTTTTCTTGAACTCAAACAGATTAACAGGAACCATTCCTCAACAGCTTTCTAATCTCACTTCACTTGAAGTTCTTTGTCTTCAAGACAATCTTCTCAATGGTTCAATCCCTTCAACTTTAGGCTCTTTGAAATCTCTTCAACAGTTTAGGATAGGTGGTAACCCTTTTCTCACAGGAAAACTCCCTTCACAGTTAGGACTATTAACCAACCTCACCACATTTGGTGCAGCTGCAACTTCACTTTCAGGTTCCATTCCATCTTCATTTGGAAGCTTAATCAATCTTCAAACTCTAGCACTTTATGATACTGAAATATCTGGTTCTATACCACCTGAACTTGGTTTATGTTCTGAGTTGAGAAATCTTTATTTACATATGAACAATCTCACTGGATATATACCTCATGAATTAGGTAAGTTGCAAAAACTTACTAGCTTGCTTCTTTGGGGGAACACATTATCTGTTGTTCTTGAACAGCTTCATTTGTCTGATAATTCGCTCACCGGTGAGATACCGTGGCAGTTGAGTAACTGCACAAGCCTTGCAACTGTTCAGCTTGACAAGAATCAGTTATCAGGTACAATTCCTTATCAGCTTGGAAAATTGAAGGTTCTGCAGAGTTTTTTCTTGTGGGGGAATTTGGTTTCTGGAACTATACCTTCTTCTTTTGGAAACTGTTCGGAACTGTATGCACTTGATCTTTCAAGGAATAAGTTAACAGGTTCTATACCAGATGAGATTTTCAGTTTGCAGAAGCTGAGTAAGCTTCTGCTTCTTGGAAATTCATTAACAGGAAGATTACCAGCAAGTGTTGCAAAATGTCAGTCTTTGGTTAGATTGAGAGTTGGAGAGAATCAGCTTTCAGGAGAGATTCCTAAAGAGATAGGACAGTTGCAGAATCTTGTGTTTCTTGATTTGTACATGAATCATTTCTCCGGAAGATTACCGGTTGAGATTGCGAATATTACAGTTCTTGAGCTTTTAGATGTGCATAACAACTATCTCGGCGGTGAAATTCCGTCGCTGATTGGTGAGCTTGAAAATTTGGAGCAGCTTGATCTCAGCAGAAACAGTTTGACAGGTGAAATCCCTTGGAGTTTCGGAAACTTGAGTTATTTGAATAAGCTTATTCTCAACAATAATTTATTAACAGGTTCAATACCAAAATCTGTTAGAAATTTACAGAAGCTAACTCTTTTGGATTTGAGTTATAATAGCTTATCTGGTAGCATACCTTCAGAGATTGGTCATGTTACAAGCTTAACAATCAGTTTGGATTTGAGCTCAAATTCATTCATAGGTGAAATACCTGATTCAATGTCTGCTTTGACACTGTTACAATCACTTGATCTTTCAAGGAACATGCTTCTTGGAGGAATTAAGGTTCTTGGTTCTCTTACTAGTCTCACTTCACTCAATATCTCCTACAACAACTTCTCAGGTCCTATTCCAGTAACTCCATTCTTCAAAACTCTAACTTCTAGTTCATATCTTCAGAACCGGAATCTGTGTCAGTCTGTTGACGGTACTACATGTTCTTCTAGTCTGATTCAAAAGAATGGTTTAAAATCTGCGAAAACCGTAGCTATGATCACAATTATTCTAGCTTCAGTTACCATAATTGTCATTGCGTCGTGGATTCTAGTAACTCGTAGTAATCATCGGTACAATGTTGAAAAGACTTTGAGGATATCAGGTTCTGTGTCAGGAGCTGAGGATTTTTCTTATCCTTGGACTTTCATACCATTTCAGAAACTGAATTTCAGCATAGATAATATATTGGATTGCTTGAAAGATGAAAATGTGATTGGAAAAGGTTGTTCTGGTGTTGTGTATAAGGCTGAGATGCCGCACGGAGAGGTAATAGCAGTGAAGAAGCTTTGGAAAACAAACAAAGGAGATGAAATGGTGGATTCTTTTGCAGCTGAGATTCAGATTCTCGGCTACATTCGGCATAGGAACATTGTAAGGCTCATAGGTTATTGTTCCAACGGGAGTGTTAAGCTTCTTCTCTATAACTTTATCCAAAATGGTAATCTAAGACAACTTTTGGAAGGGAATAGGAACTTAGACTGGGAAACTAGGTACAAGATTGCTGTTGGATCAGCTCAGGGTTTATCTTACCTTCATCATGATTGTGTTCCAGCAATTCTTCACAGAGATGTTAAGTGCAATAACATACTTCTAGATTCCAAATATGAGGCTTATCTTGCAGATTTTGGCCTTGCAAAGCTAATGAATTCACCAAATTATCATCATGCAATGTCTAGAGTTGCTGGTTCCTATGGCTATATTGCCCCAGAGTATGGCTACACCATGAACATAACAGAGAAGAGTGATGTATACAGTTATGGAGTTGTTTTACTAGAGATCCTAAGTGGGAGAAGTGCTGTTGAATCCCAACAAGTTGGAGATGGACAACACATAGTTGAATGGGTGAAGAAGAAAATGGCAAGTTTTGAACCAGCTGTGTCAATACTAGATACAAAGCTTCAAAGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAATTCTTCGCCAGTTGAACGTCCGACTATGAAAGAAGTTGTTGCATTACTGATGGAGGTGAAGAGTCAGCCTCATGAGGAGATGGGAAAGACTTCTCAACCTTTAATCAAACAGTCATCAACTCAATGCTGA 3120 0.3856 MENISVTSLFFCLLFFSITKIQVTSLSPDGQALLSLVPSSPSLLSSWNHSISTPCSWKGITCSPQSRVISLSIPDTFLNLTSLPPQLSSLTMLQLLNLSSTNLSGSIPPSFGQLSHLQLLDLSSNSLTGSIPNQLGNLSSLQFLFLNSNRLTGTIPQQLSNLTSLEVLCLQDNLLNGSIPSTLGSLKSLQQFRIGGNPFLTGKLPSQLGLLTNLTTFGAAATSLSGSIPSSFGSLINLQTLALYDTEISGSIPPELGLCSELRNLYLHMNNLTGYIPHELGKLQKLTSLLLWGNTLSVVLEQLHLSDNSLTGEIPWQLSNCTSLATVQLDKNQLSGTIPYQLGKLKVLQSFFLWGNLVSGTIPSSFGNCSELYALDLSRNKLTGSIPDEIFSLQKLSKLLLLGNSLTGRLPASVAKCQSLVRLRVGENQLSGEIPKEIGQLQNLVFLDLYMNHFSGRLPVEIANITVLELLDVHNNYLGGEIPSLIGELENLEQLDLSRNSLTGEIPWSFGNLSYLNKLILNNNLLTGSIPKSVRNLQKLTLLDLSYNSLSGSIPSEIGHVTSLTISLDLSSNSFIGEIPDSMSALTLLQSLDLSRNMLLGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFKTLTSSSYLQNRNLCQSVDGTTCSSSLIQKNGLKSAKTVAMITIILASVTIIVIASWILVTRSNHRYNVEKTLRISGSVSGAEDFSYPWTFIPFQKLNFSIDNILDCLKDENVIGKGCSGVVYKAEMPHGEVIAVKKLWKTNKGDEMVDSFAAEIQILGYIRHRNIVRLIGYCSNGSVKLLLYNFIQNGNLRQLLEGNRNLDWETRYKIAVGSAQGLSYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNSPNYHHAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESQQVGDGQHIVEWVKKKMASFEPAVSILDTKLQSLPDQMVQEMLQTLGIAMFCVNSSPVERPTMKEVVALLMEVKSQPHEEMGKTSQPLIKQSSTQC* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2208 1039 ProSitePatterns Protein kinases ATP-binding region signature. 746 769 IPR017441 GO:0005524
Mal1g2208 1039 SUPERFAMILY Protein kinase-like (PK-like) 725 1013 IPR011009 -
Mal1g2208 1039 PANTHER UNNAMED PRODUCT 8 297 - -
Mal1g2208 1039 PANTHER UNNAMED PRODUCT 298 1035 - -
Mal1g2208 1039 Pfam Protein kinase domain 742 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2208 1039 Gene3D Phosphorylase Kinase; domain 1 718 817 - -
Mal1g2208 1039 SUPERFAMILY L domain-like 33 298 - -
Mal1g2208 1039 SMART LRR_typ_2 369 393 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 114 137 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 283 306 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 90 113 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 138 161 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 537 561 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 162 186 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 235 259 IPR003591 -
Mal1g2208 1039 SMART LRR_typ_2 489 512 IPR003591 -
Mal1g2208 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 860 872 IPR008271 GO:0004672|GO:0006468
Mal1g2208 1039 Gene3D Ribonuclease Inhibitor 390 662 IPR032675 -
Mal1g2208 1039 PANTHER - 8 297 - -
Mal1g2208 1039 Gene3D Ribonuclease Inhibitor 301 389 IPR032675 -
Mal1g2208 1039 Pfam Leucine Rich Repeat 491 513 IPR001611 GO:0005515
Mal1g2208 1039 ProSiteProfiles Protein kinase domain profile. 740 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2208 1039 Gene3D Ribonuclease Inhibitor 199 300 IPR032675 -
Mal1g2208 1039 SUPERFAMILY RNI-like 303 641 - -
Mal1g2208 1039 Gene3D Transferase(Phosphotransferase) domain 1 818 1036 - -
Mal1g2208 1039 SMART serkin_6 740 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2208 1039 PANTHER - 298 1035 - -
Mal1g2208 1039 Gene3D Ribonuclease Inhibitor 28 198 IPR032675 -
Mal1g2208 1039 Pfam Leucine rich repeat 348 406 IPR001611 GO:0005515
Mal1g2208 1039 Pfam Leucine rich repeat 93 151 IPR001611 GO:0005515
Mal1g2208 1039 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Mal1g2208 1039 PRINTS Leucine-rich repeat signature 489 502 - -
Mal1g2208 1039 PRINTS Leucine-rich repeat signature 117 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2208 Mal-Chr1 29167553 29171226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2208 21 1033 Receptor kinase-like Gene Family AT5G56040 43.744 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g2208 Pkinase 8.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2208 - - gmx:100819611 1579.69