Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2200 ATGCCTGAATCGGAGACGGGGACACCGACAGCTGCGTCGGTGCCGGCGACACCGGATACTCCGGGGGGACCATTATTCTCATCGGTGAGAATTGATTCACTTGATCAACGTGAGTCTTTTGCAATGGGGAGGTGCAACATGTGTATGCCGGGTGGTAAAAGCAATGGTTGCATCGCTAATTTCTCTGCTGGAGTTCCGAGTGTCTCTCTCAGTCAGAAGATTGGAGCAGAGTTTGTTGGAACATTCATATTGATATACGCAGCAACAGCAGGACCAATAGTGAACAACAAATACAATGGAGTAGAAACACTTATGGGAAATGCAGCATGTGCTGGATTAACAGTCATGTTCATTATTCTCTCAATTGGTCATATCTCAGGTGCACATCTCAATCCATCACTCACCATTGCCTTCGCAGCGTTTCGCCATTTTCCGTGGGCACATGTTCCAGCCTACATTGCAGCACAAGTCTCTGCTTCGATCTGCGCTTGTTATGCGCTCAAAGGTGTTTACCATCCTTTCCTCTCTGGTGGTGTCACTGTCCCTACTGTTGGCGTTGGACAAGCTTTTGCAACCGAGTTTATCATCACTTTTATTCTCTTGTTTGTTGTTACTGCTGTTGCTACTGATTCCCGCGCGGTTGGTGAATTGGCTGGTATTGCTGTTGGAGCTACAGTTTTGCTCAATATTCTTATCTCAGGGCCAACAAGTGGTGGTTCCATGAATCCGGTGCGCACCTTGGGTCCAGCCGTTGCAGCAGGAAATTACAAGCATATCTGGATATATTTGGTGGCGCCGACACTTGGTGCTCTAGCTGGTTCTGGAGTTTATACACTTATCAAGCTGCGTGACAACGGAACTGAACCGCCTCAACCGGTTAGGAGCTTCCGTCGCTAG 897 0.4827 MPESETGTPTAASVPATPDTPGGPLFSSVRIDSLDQRESFAMGRCNMCMPGGKSNGCIANFSAGVPSVSLSQKIGAEFVGTFILIYAATAGPIVNNKYNGVETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWAHVPAYIAAQVSASICACYALKGVYHPFLSGGVTVPTVGVGQAFATEFIITFILLFVVTAVATDSRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGSGVYTLIKLRDNGTEPPQPVRSFRR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2200 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Mal1g2200 298 SUPERFAMILY Aquaporin-like 69 285 IPR023271 -
Mal1g2200 298 MobiDBLite consensus disorder prediction 1 25 - -
Mal1g2200 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 MobiDBLite consensus disorder prediction 1 15 - -
Mal1g2200 298 Pfam Major intrinsic protein 67 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal1g2200 298 PANTHER AQUAPORIN NIP5-1-RELATED 10 295 - -
Mal1g2200 298 PANTHER AQUAPORIN NIP2-1 10 295 IPR034294 -
Mal1g2200 298 Gene3D Glycerol uptake facilitator protein. 62 291 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2200 Mal-Chr1 28969201 28974794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2200 25 298 Major Intrinsic Protein MIP AT4G10380 71.326 1.43e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2200 K09874 - gmx:100804356 516.153