Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2197 ATGAGCTCCAAAGCTCCTCAAACTCATTCAATTGATGCATTGAAGTTTAAAATGTCTTCTCAAAAGGATCCAGATAAGTTCTTCATGTCTATCACTCAAGGAGATAATAACCCATTTGACTATTTTCGTGCTCTATATGAGGGTTGCATTGCTGGAGGTGTTGCTGGTGTTTCCGTAGAAGCAGCTTTATACCCCATTGATACCATCAAAACTCGACTACAGGTCGCTCGTGGTGGAGTAAATATTGTTTTCAAGGGTTTGTATTCTGGATTGGCTGGAAATCTTGCTGGTGTGTTACCAGCTTCTGCGATTTTTATTGGTGTGTATGAACCAACAAAGCATAAATTGCTGAAGATCTTCCCTGAGAATCTAAGCGCTTTGGCTCATATTGCTGCAGGTACTATTGGAGGAGCCGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATACAAATTGGTCAATTCAAATCAGCCCCAGATGCTGTCCGTCTTATCATTGCTAATGAGGGTTTTAAAGGTCTTTTTGCGGGATATAGATCTTTCTTATTGAGAGATTTACCGTTTGATGCTTTAGAATTATGCATCTACGAACAGCTCCGTATCGGGTATAAATTAGCGGCAAAAAGAGATCTGAATGATCCAGAGAATGCTATGCTTGGGGCTTTTGCTGGTGCCATAACTGGAGCAGTTACGACTCCTCTTGACGTAGTAAAAACCAGATTGATGGTTCAGGGAACACAAAAACATTACAAAGGCATTTATGATTGTGTGAGGACAATAGTTAAAGAAGAAGGAGCTAATGCTCTTTTTAAGGGTATTGGGCCAAGAGTGGTGTGGATAGGAATAGGTGGTTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGAAAATTCTTGCTCAGAAGCACCCTCAAACTGATGCTCAGAAGTGA 942 0.4066 MSSKAPQTHSIDALKFKMSSQKDPDKFFMSITQGDNNPFDYFRALYEGCIAGGVAGVSVEAALYPIDTIKTRLQVARGGVNIVFKGLYSGLAGNLAGVLPASAIFIGVYEPTKHKLLKIFPENLSALAHIAAGTIGGAASSLVRVPTEVVKQRIQIGQFKSAPDAVRLIIANEGFKGLFAGYRSFLLRDLPFDALELCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAITGAVTTPLDVVKTRLMVQGTQKHYKGIYDCVRTIVKEEGANALFKGIGPRVVWIGIGGSIFFGVLEKTKKILAQKHPQTDAQK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2197 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Mal1g2197 313 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 4 311 - -
Mal1g2197 313 Pfam Mitochondrial carrier protein 219 305 IPR018108 -
Mal1g2197 313 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Mal1g2197 313 Pfam Mitochondrial carrier protein 46 78 IPR018108 -
Mal1g2197 313 SUPERFAMILY Mitochondrial carrier 47 296 IPR023395 -
Mal1g2197 313 Gene3D Mitochondrial carrier domain 47 313 IPR023395 -
Mal1g2197 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 115 IPR018108 -
Mal1g2197 313 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 4 311 - -
Mal1g2197 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2197 Mal-Chr1 28944424 28950688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2197 118 307 Chloroplast and Mitochondria Gene Families AT1G07030 30.303 1.66e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2197 K15111 - gmx:100800051 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2197 1 28944424 28950688 Mal1g2197 1 28944424 28950688 ECH