Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2188 ATGGGCTGTGTTCAAGCCAAGCCCTTAGAATCTGAAGCTACTTCAAACTACAGAGGACTAGACAGGTTCAAAATGGAAAATGGGTATGTTCCAAGTTCTGATTTTGTTGCTCATAGAAGATCTACTGGTCAAAGTCAAAAACATGTTGAGAAGGCTAAGGATATTCAGAGACAACCCAGAAAGAATAAAGTTGTTGATGGCAATGGTGGTGGAAGAGGAAAGAGAGATGGTGAGATGAAAGATAGTAAGAAGCAGTTGAATAGGTGTTTTGATGACGAGATGGTTGATGGTTGGCCTAAATGGTTGGTTGATAATGTTCCTTCTCAAGTGTTGGCTGGTGTGGTTGCTAAGAGTGCTGAATCTTATAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGACACCGGAGATATTGTGGCCCTCAAAAAGGTTCGCTTCAATACATCACAGCCCGAGAGCATTAAATTTATGGCAAGAGAAATCACGATATTACAGAGATTGGATCATCCCAATGTAGTAAAACTTAAAGGGTTAGCCACTTCAAGAATGCAGTACAGCATATATCTAGTTTTTGATTTCATGCCAACAGATTTGTCGAGAATTATTTCTCAGCCTGGAGAAAGACTAACCGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTTCAGCATTGCCATGATAGAGGAATTTTGCATCGAGATATAAAAGGGTCAAATCTTTTGATCGATAAAAATGGGATGCTTCAGATTGCAGATTTTGGACTTGCCAATTATTATAGTCCAAATCAAGACCAGCCTCTCACAAACAGGGTTGTGACTCTATGGTACAGAGCTCCTGAATTGTTGTTAGGTTCCACAGATTATGGTGTTGGTATTGATCTATGGAGTGTTGGATGTCTCCTTGCAGAAATGTTTAAAGGAATTCCAATCATGCCTGGAAGAACAGAGGTTGAGCAACTTCATAGAATTTTCAGGTTATGTGGCACACCGTCACAAGAGTATTGGAGAAAGTTGAAACTTTCTACAACTTTTATACCTCCAAAGTCTTATAGACCAAGTCTGGTAGAAACTTTCAAGGATCTGCCCCCGTCTTCTTTAGGTCTTTTATGTACTCTTCTTGCTTTGGATCCAGCATTCCGCGGCAGTGCATCTAAAGCTCTTAAAAATCAGTTTTTCTTTACAAGCCCATTGGCTTGTGATCTATCTGGTCTGCCATCAATCTACAAAGAAGATGATGAGCATACCCCAGCTAAAGAACAGATAAAGTATATTAACTCTAAAATCAGGCGATCTCGTAAGTTTATGGAGCGTCGCAAGAATTTAGCATCTAATAGGCCAATAGAACATACTGTATCCTCTAAAGAGGTATTGAGAAGTAATGGTGAGGCTGAAACTTATGTTCCAAGTGAAGAACCAGGTAGTGCAACAAGTAGTACTTCATCTAGTGTTAATCAAGCTGGAGTTGGGGACCACTCACCTCTCTTTCTCTCTCCATTTCTTGGTTATGATCAAAAGCAGCCCCACAAAATCCATAGTAGGCGTGCTAATATTGGTGAAAAAAACATCAAGAACCTTCCTCCATTATCAAAGCCAAAACCAAATGCAACCAAGAAAGATGATGGCAGATACAGAACAGACCAGATTTTCAGGTCCACTTCCACCAGAGAATTTAGAAAACTAAAAGCAGAAGAGCATTTACTCTTTGATTAG 1746 0.3975 MGCVQAKPLESEATSNYRGLDRFKMENGYVPSSDFVAHRRSTGQSQKHVEKAKDIQRQPRKNKVVDGNGGGRGKRDGEMKDSKKQLNRCFDDEMVDGWPKWLVDNVPSQVLAGVVAKSAESYKMIDKVGQGTYSNVYKALDRDTGDIVALKKVRFNTSQPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMPTDLSRIISQPGERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLQIADFGLANYYSPNQDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSVGCLLAEMFKGIPIMPGRTEVEQLHRIFRLCGTPSQEYWRKLKLSTTFIPPKSYRPSLVETFKDLPPSSLGLLCTLLALDPAFRGSASKALKNQFFFTSPLACDLSGLPSIYKEDDEHTPAKEQIKYINSKIRRSRKFMERRKNLASNRPIEHTVSSKEVLRSNGEAETYVPSEEPGSATSSTSSSVNQAGVGDHSPLFLSPFLGYDQKQPHKIHSRRANIGEKNIKNLPPLSKPKPNATKKDDGRYRTDQIFRSTSTREFRKLKAEEHLLFD* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2188 581 MobiDBLite consensus disorder prediction 41 83 - -
Mal1g2188 581 SMART serkin_6 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2188 581 MobiDBLite consensus disorder prediction 449 500 - -
Mal1g2188 581 MobiDBLite consensus disorder prediction 528 558 - -
Mal1g2188 581 MobiDBLite consensus disorder prediction 38 83 - -
Mal1g2188 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Mal1g2188 581 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Mal1g2188 581 MobiDBLite consensus disorder prediction 482 500 - -
Mal1g2188 581 ProSiteProfiles Protein kinase domain profile. 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2188 581 Pfam Protein kinase domain 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2188 581 Gene3D Transferase(Phosphotransferase) domain 1 205 443 - -
Mal1g2188 581 SUPERFAMILY Protein kinase-like (PK-like) 118 408 IPR011009 -
Mal1g2188 581 PANTHER CELL DIVISION PROTEIN KINASE 1 547 - -
Mal1g2188 581 MobiDBLite consensus disorder prediction 457 471 - -
Mal1g2188 581 PANTHER CYCLIN-DEPENDENT KINASE 1 547 - -
Mal1g2188 581 Gene3D Phosphorylase Kinase; domain 1 111 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2188 Mal-Chr1 28830615 28834118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2188 116 465 Core Cell Cycle Gene Families AT5G10270 42.391 1.30e-94 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal1g2188 Pkinase 3.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2188 K08819 - gmx:100776854 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2188 1 28830615 28834118 Mal1g2188 1 28830615 28834118 ECH