Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2182 ATGGATCACGCTGCCCTTACCGTCCTCGCCGCCGTCGGCAGCTTCTTCATCGTCACAGTCATACTCGCCGCCATCATACTCATCTGCCAACACCGCAAATCCACCCAAACCCGCCGCAACAACCAGATCCGAACCCGACCACTTCGAAACCCAAATCACTACCCAACCAGCTCCACCTCCCTCCCCGTCGACGCCAGCTGGTCATGGGACCCAAATCTCAAAATCTCCATGGAAGAACTCTCACGCGCCACCAACGATTTCTCCCCTAACCTCATCGTCGGCGACGGCAGCTTCGGCCTTGTCTACAAAGCTCGTCTCTCCACCGGTGCAGTCGTCGCTGTCAAAAAACTCTCCCCCGACGCTTTTCAAGGTTTCCGTGAATTCGCGGCGGAGATGGAAACGCTAAGCAAACTCCGCCACCACAACATCGTTAAAATCCTCGGGTATTGGGCTTCTGGACCTGAACGGTTACTCGTTTACGAGTTCGTTGAAAAAGGAAATCTCGATCAATGGCTTCATGAATCTTCTTCAAGCTCTTCTCAAACTCACCAAAACGACGACGTTTCTATTTCAATCGATCTCATTCGTTTTCCTTTAACTTGGGAAACACGTGTCAAAATCATGCGTGGTGTTGCTCATGGGCTTTGTTATTTACATGGGCTTGAAAAGCCCATTATTCATCGAGATATCAAAGCTAGTAATGTTTTGTTGGACTCTGAGTTTCAGGCTCATATTGCTGATTTTGGGCTCGCACGTAGGATGGATAAATCGCATTCACACGTGTCAACGCAGGTGGCGGGTACTATTGGTTACATGCCACCGGAGTATAGAGATGGGTCTAATGTAGCAAACCCGAAAGTGGATGTGTATAGTTTTGGAGTGTTGATGATTGAAACTGTGTCGGGCCATAGGCCCAATTTGGCTGTGAAATTGGAAGGAAATGATATTGGGCTTGTTAATTGGGCCAGGAAGATGAAGGAAAGGAACACTGAAATGGAGATGTTGGATGTAAATATTCCAAGAGATGAAGGATTGAATTTGGAGAGTGTTAGGGAGTATGTACATATTGCTTGTATGTGTACTGGTGAGTTACAGAAGGATAGGCCTGAAATGCCTGAGGTTGTTAAATTGTTGGACTCAATGCCCCTATGA 1152 0.4766 MDHAALTVLAAVGSFFIVTVILAAIILICQHRKSTQTRRNNQIRTRPLRNPNHYPTSSTSLPVDASWSWDPNLKISMEELSRATNDFSPNLIVGDGSFGLVYKARLSTGAVVAVKKLSPDAFQGFREFAAEMETLSKLRHHNIVKILGYWASGPERLLVYEFVEKGNLDQWLHESSSSSSQTHQNDDVSISIDLIRFPLTWETRVKIMRGVAHGLCYLHGLEKPIIHRDIKASNVLLDSEFQAHIADFGLARRMDKSHSHVSTQVAGTIGYMPPEYRDGSNVANPKVDVYSFGVLMIETVSGHRPNLAVKLEGNDIGLVNWARKMKERNTEMEMLDVNIPRDEGLNLESVREYVHIACMCTGELQKDRPEMPEVVKLLDSMPL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2182 383 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 1 380 - -
Mal1g2182 383 ProSiteProfiles Protein kinase domain profile. 87 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2182 383 Pfam Protein kinase domain 92 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2182 383 SUPERFAMILY Protein kinase-like (PK-like) 53 377 IPR011009 -
Mal1g2182 383 PANTHER OS01G0253100 PROTEIN 1 380 IPR045271 GO:0004714|GO:0006468
Mal1g2182 383 MobiDBLite consensus disorder prediction 38 59 - -
Mal1g2182 383 Gene3D Transferase(Phosphotransferase) domain 1 163 382 - -
Mal1g2182 383 Gene3D Phosphorylase Kinase; domain 1 55 162 - -
Mal1g2182 383 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Mal1g2182 383 CDD STKc_IRAK 93 381 - -
Mal1g2182 383 SMART serkin_6 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2182 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2182 Mal-Chr1 28774740 28775891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2182 5 381 Receptor kinase-like Gene Family AT1G55610 37.270 3.39e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mal1g2182 Pkinase 7.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2182 - - lang:109335579 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2182 1 28774740 28775891 Mal1g2182 1 28774740 28775891 ECH