Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2170 ATGGCTTCCTCCAAGCTCATTTCTTCTTCCAACACCGATCCACCTTCTTCTCCATCTTCTAAACCTCACTTCACCGCCAATTTCCTCGACGATCAAATGTCCCTCGCCGACGCCGTCGGTACTCCCAGAACTGTCGACGATGTCTGGCGAGAGATCGTTGCCGGTGATGTCAACGTCTCCGGCGATCACAGGGAGTGTAAGGAGGAGATCTCCGATGAAATGATGACGCTGGAGGATTTTCTTGTGAAAGCTGGTGCTGTTGAGGATGGTGATGAAGGGGAGGATGTTAAGATGACGATTCCGTTATCGGAGACGCTTAGTGGTAGTGGTATGTTTTCGTTGGATTCGACTTTTCAGGGAATTGATAACGTTGAAGGTTCGGTGATAGGGTTTGGGAATGGGAATGGGAATGGAAATGGGATGGAAATGGTTGAAGGTGGAGGGAGAGGGAAGAGAGGACGGCCTGTTTTGGAGCAGTTGGATAAAGCTGCTCAGCAGAGACAGAGGAGAATGATCAAGAATAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTATCAAGTGGAATTGGAATCCTTGGCTGTGAAGCTAGAGGAGGAAAATGACAGATTGATGAAGGAAAAGGCTGCTAGGAAAAAGGAGAGGTTCAAGCAGCTGAAGGTTGCTTGCTACTGA 681 0.489 MASSKLISSSNTDPPSSPSSKPHFTANFLDDQMSLADAVGTPRTVDDVWREIVAGDVNVSGDHRECKEEISDEMMTLEDFLVKAGAVEDGDEGEDVKMTIPLSETLSGSGMFSLDSTFQGIDNVEGSVIGFGNGNGNGNGMEMVEGGGRGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDRLMKEKAARKKERFKQLKVACY* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2170 226 CDD bZIP_plant_BZIP46 166 208 - -
Mal1g2170 226 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 216 IPR004827 GO:0003700|GO:0006355
Mal1g2170 226 SUPERFAMILY Leucine zipper domain 166 217 IPR046347 GO:0003700|GO:0006355
Mal1g2170 226 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Mal1g2170 226 PRINTS cAMP response element binding (CREB) protein signature 179 199 - -
Mal1g2170 226 PRINTS cAMP response element binding (CREB) protein signature 199 216 - -
Mal1g2170 226 PRINTS cAMP response element binding (CREB) protein signature 97 112 - -
Mal1g2170 226 PRINTS cAMP response element binding (CREB) protein signature 161 177 - -
Mal1g2170 226 MobiDBLite consensus disorder prediction 1 25 - -
Mal1g2170 226 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 39 220 - -
Mal1g2170 226 Gene3D - 164 216 - -
Mal1g2170 226 SMART brlzneu 162 224 IPR004827 GO:0003700|GO:0006355
Mal1g2170 226 Coils Coil 185 216 - -
Mal1g2170 226 Pfam bZIP transcription factor 164 222 IPR004827 GO:0003700|GO:0006355
Mal1g2170 226 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 39 220 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2170 Mal-Chr1 28630856 28632663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2170 12 221 bZIP Transcription Factor Family AT5G44080 44.672 1.93e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g2170 bZIP_1 8.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2170 K14432 - gmx:100808917 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2170 1 28630856 28632663 Mal1g2170 1 28630856 28632663 ECH