Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2158 ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGCTCCGGTGAGAATATTGTTCCGGTGGCCGCGACGCAAAACGGCTGCGGTGGTGGTGGTGAGGAAGATGATAAGATGATGAATATGAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAAGTTTCAAGGAAACTAGCTGAACTTGGTTATCATAGAAGCTCAAAAAAGTGCAAAGAGAAATTTGAAAATGTATACAAGTACCACAAAAGAACCAAAGAAGGTAGAAGTGGAAAATCAGAAGGAAAAACCTATAGGTTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCCACTTACTCTCCAAAACCACAACAAAATAATAACACACCCACATCTTATCCTCCAAAAACACAACAAAATAATAACACACTCTCATCACCAACAACAAAGCCCAATGATACCACACAAACAATATCACATGTCACAACCACTGTTCCATTCACAAACCCTACCACACTCATTTCTCCTTCACCACAACCTAACAACAAAAATGTTCAATGTAATTCTCTCCCCAATATGAACCTATTATTCTCAACCACAACAACCTCAACTTCTTCTTCCACGGCTTCTGACGAAGACTTGGAAGAGAAGTACAGAAAGAAGAGAAAATGGAAAGACTATTTCAGAAGACTAACAAGACAAGTGCTTGCAAAACAAGAGGATATGCAAAAGAAATTCTTAGAAGCCATAGACAAGCGCGAAAAAGAACACATGGCTCAACAAGATGCTTTGAGAATTCAAGAAATGAATAGAATCAATAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAACCACCACCACAACCACCGCCAGCGCCAGAGCTGTCTCCAGCTCTGGCATCACAAGTTCAAACACAACAACAACTAGTGATACCAAACAACAACATTGTTGAAATTCCAAATATGAATAATGGTTACAAAAGTGGTAATAATGGTGGTTCTTCTCCTTCTCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAAGCAAAGTATCAAGAAAATGGACCAAAAGCTCCATTGTGGGAAGATATTTCAGCTGAAATGAAGAGGCAAGGATACAATAGGAATGCGAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAGTACTACAAGAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGTAAGACATGTCCTTATTTTCATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACAATGCAGAATCCTTTTGGTTCTAATTCGTTACATAGTATGAAGTCAAGTGAGATGATGGAGCCATTGATGGTGCAACCAGAACAACAATGGAAACCTCCAATTCAATATGAAGAGGGTCATGCAGAGAAGAAGAATATTCATGAAGAAAAAGAAGATGATAATGGTGATGTTGATGATGATGATGAAGATGGAAACATGGATGAATATGAAGATGGTGATAGCATGGAAGAAGATGAAGGTGGTGTTAGTAGCCGTTATGAAGTTGTAACACATAAACTTCCTTCTATGAACACAGTTGAATGA 1734 0.3829 MQLGDATVMMETCSGENIVPVAATQNGCGGGGEEDDKMMNMNINGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSTYSPKPQQNNNTPTSYPPKTQQNNNTLSSPTTKPNDTTQTISHVTTTVPFTNPTTLISPSPQPNNKNVQCNSLPNMNLLFSTTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEDMQKKFLEAIDKREKEHMAQQDALRIQEMNRINKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPPAPELSPALASQVQTQQQLVIPNNNIVEIPNMNNGYKSGNNGGSSPSPSRWPKSEVHALIRIRTSLEAKYQENGPKAPLWEDISAEMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFHELEAIYKEKNKTMQNPFGSNSLHSMKSSEMMEPLMVQPEQQWKPPIQYEEGHAEKKNIHEEKEDDNGDVDDDDEDGNMDEYEDGDSMEEDEGGVSSRYEVVTHKLPSMNTVE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2158 577 MobiDBLite consensus disorder prediction 529 554 - -
Mal1g2158 577 CDD GT1 50 114 - -
Mal1g2158 577 MobiDBLite consensus disorder prediction 505 577 - -
Mal1g2158 577 ProSiteProfiles Myb-like domain profile. 49 107 IPR001005 -
Mal1g2158 577 Pfam Myb/SANT-like DNA-binding domain 49 135 IPR044822 -
Mal1g2158 577 Pfam Myb/SANT-like DNA-binding domain 383 470 IPR044822 -
Mal1g2158 577 ProSiteProfiles Myb-like domain profile. 377 441 IPR001005 -
Mal1g2158 577 Gene3D - 51 112 - -
Mal1g2158 577 Gene3D - 385 446 - -
Mal1g2158 577 PANTHER - 1 567 - -
Mal1g2158 577 CDD GT1 383 448 - -
Mal1g2158 577 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 1 567 - -
Mal1g2158 577 SMART sant 47 109 IPR001005 -
Mal1g2158 577 SMART sant 381 443 IPR001005 -
Mal1g2158 577 MobiDBLite consensus disorder prediction 513 528 - -
Mal1g2158 577 MobiDBLite consensus disorder prediction 142 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2158 Mal-Chr1 28455314 28457844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2158 45 506 Trihelix Transcription Factor Family AT1G76890 50.816 2.43e-142 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g2158 Myb_DNA-bind_4 2.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2158 - - gsj:114370603 639.032