Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2157 ATGCTGGGTGACTCGGCTGTGCTGGGTGGTGGCGGTGGTGGAGATGCAGTGGCAGCAACAACAGCTGCACCACCCCATATGACGGTTGAAGGTGGTGGTGGTGGTGGTGGAGTTGGATCAAATTCAGAGAGTGATATTGAAAGAGGTAGAGTTGAAGATGGTGAACGTAGCTTCGGCGGTAATCGGTGGCCGCGACAAGAAACTTTGGCGCTTTTAAGGATACGATCGGATATGGATACAACGTTTCGAGATGCAAGTGTTAAGGGTCCCTTGTGGGATGAAGTTTCAAGGAAGCTAGCTGAACTTGGGTACCACAGAAGTGGAAAAAAATGCAAGGAGAAATTTGAAAATGTTTATAAGTACCATAAGAGAACCAAAGATGGTCGAGGTGGAAAATCAGATGGTAAAACTTATCGATTTTTTGATGAATTAGAAGCCTTTGATCATTTTCATAGCCACCCTTCAACTCATCAACAACACCAACCTCAAAACCCATCAAATCCACAACAAATTTCATCACAAGCTGTAACAACCACAACCGTCTCAACAATACCAATGTCATTGCCACCGGTCGTTAACACCACACTTAGTATCCCTCATGTAACCGTTCCATCAATTCCAATGCCTCAAAACAATATTGCAACTACCCAACAAATTATGAATATGAATCCTACAATCTCATCAAATCCTTCAACTACTTTCCAACCATCAACAACAAACCCTACTACTACTACTACCAATCCTCTTCCATCTTTCCCTACCATTTCTGCAGATCTATTATCCAATTCAATGGCGAGCTCGTACTCTACCTCATCCGAAGACACAATGGAAGAAGGATCGCGAAAGAGGAAGCGAAAATGGAAGGATTTTTTTGGGAGACTAATGAAGGAAGTGATAGAAAAACAAGAGGATTTGCATAAGAAATTTATGGAGGCCATTGAGAAACGCGAGCAGGAACGGGTTGTTAGAGAAGAAGCGTGGAGAGCACAAGAGATGCAAAGAATCAATAGAGAAAGGGAAATTCTCGCACAAGAAAGATCTATAACTGCATCAAAAGATGCTGCAGTTATGTCTTTCTTGCAAAAAATCGCCGAACAACAAAATCTTGGACAAGCCTTACACATCAATATTGCGCAAACACCGCCACCACAACAACAACCACAAAGAAATATAGCACCAACATCAGCACCAGCACCAGCACCGGCACCAACATCAGTGGTTCAAGTTAGCACACCGCCGCCAGCACAACCACCTCCGGTTAATAAGATAGGGCCACTAATAGTCCCGCAGCAGCAACAACAACAACAACTGGTGACGAATATGGAGATAGTAAAAATTGATAACAACGGCGATAGTTTCATGGGAGCAAGTTCATCGAGGTGGCCGAAGGTGGAAGTTCAAGCACTGATAAATCTGAGAACAAGCATGGACAATAAGTACCAAGAGAATGGACCAAAAGGGCCACTATGGGAGGAGATATCTTCAGCAATGAAAAGCCTTGGGTACAATAGGAATGCAAAAAGGTGCAAAGAAAAATGGGAGAACATAAACAAGTACTTCAAGAAAGTGAAAGAAAGTAACAAAAAGAGACCGGAAGATTCAAAGACATGTCCTTATTTTCATCAGCTGGATGCTTTGTATAAGGAGAAAGGAAAGGGAGACAATTCCGGTGGCGGTGTTGATGGTTCGAATCAGGTGGTGAAAGCGGAGAATATGGCGGCGCCGCTTATGGTTCAGCCAGAGCAGCAATGGCGGCCACCTCAGCAGGGAGAAGATCAAATGCAACCAAACCGTGGAGAGGAAGAAGATGATATGGATGAAGATGATAAGGATGGTGAGGAAGAAGATGAAGAAGAAGATATGGATGAAAGTGGTAGTGGTGGTGGTGGTAACTTTGAGGTAGTGGCAAACAAGCCTGCAGTGGGTACATGA 1932 0.4384 MLGDSAVLGGGGGGDAVAATTAAPPHMTVEGGGGGGGVGSNSESDIERGRVEDGERSFGGNRWPRQETLALLRIRSDMDTTFRDASVKGPLWDEVSRKLAELGYHRSGKKCKEKFENVYKYHKRTKDGRGGKSDGKTYRFFDELEAFDHFHSHPSTHQQHQPQNPSNPQQISSQAVTTTTVSTIPMSLPPVVNTTLSIPHVTVPSIPMPQNNIATTQQIMNMNPTISSNPSTTFQPSTTNPTTTTTNPLPSFPTISADLLSNSMASSYSTSSEDTMEEGSRKRKRKWKDFFGRLMKEVIEKQEDLHKKFMEAIEKREQERVVREEAWRAQEMQRINREREILAQERSITASKDAAVMSFLQKIAEQQNLGQALHINIAQTPPPQQQPQRNIAPTSAPAPAPAPTSVVQVSTPPPAQPPPVNKIGPLIVPQQQQQQQLVTNMEIVKIDNNGDSFMGASSSRWPKVEVQALINLRTSMDNKYQENGPKGPLWEEISSAMKSLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKGKGDNSGGGVDGSNQVVKAENMAAPLMVQPEQQWRPPQQGEDQMQPNRGEEEDDMDEDDKDGEEEDEEEDMDESGSGGGGNFEVVANKPAVGT* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2157 643 MobiDBLite consensus disorder prediction 394 420 - -
Mal1g2157 643 ProSiteProfiles Myb-like domain profile. 61 119 IPR001005 -
Mal1g2157 643 MobiDBLite consensus disorder prediction 1 62 - -
Mal1g2157 643 MobiDBLite consensus disorder prediction 379 393 - -
Mal1g2157 643 Coils Coil 299 319 - -
Mal1g2157 643 MobiDBLite consensus disorder prediction 597 624 - -
Mal1g2157 643 MobiDBLite consensus disorder prediction 379 420 - -
Mal1g2157 643 CDD GT1 459 524 - -
Mal1g2157 643 MobiDBLite consensus disorder prediction 45 60 - -
Mal1g2157 643 CDD GT1 61 126 - -
Mal1g2157 643 Pfam Myb/SANT-like DNA-binding domain 61 146 IPR044822 -
Mal1g2157 643 Pfam Myb/SANT-like DNA-binding domain 459 546 IPR044822 -
Mal1g2157 643 SMART sant 457 519 IPR001005 -
Mal1g2157 643 SMART sant 59 121 IPR001005 -
Mal1g2157 643 MobiDBLite consensus disorder prediction 153 178 - -
Mal1g2157 643 PANTHER - 2 637 - -
Mal1g2157 643 MobiDBLite consensus disorder prediction 156 178 - -
Mal1g2157 643 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 637 - -
Mal1g2157 643 Gene3D - 461 522 - -
Mal1g2157 643 Gene3D - 63 124 - -
Mal1g2157 643 MobiDBLite consensus disorder prediction 227 252 - -
Mal1g2157 643 ProSiteProfiles Myb-like domain profile. 459 517 IPR001005 -
Mal1g2157 643 MobiDBLite consensus disorder prediction 578 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2157 Mal-Chr1 28402285 28405113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2157 59 601 Trihelix Transcription Factor Family AT1G76890 46.499 1.25e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g2157 Myb_DNA-bind_4 2.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2157 - - gmx:100811604 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2157 1 28402285 28405113 Mal1g2157 1 28402285 28405113 ECH
Mal8g3535 8 100411330 100414513 Mal1g2157 1 28402285 28405113 PCT