Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2152 ATGGAGCAGCAGTCTAAGGATGTTCTAGATTATTTTGATACGAAGGTCACTCAGATTGTTACCGAGTTCAAGGAACAAGGGCTAAATACTGAGTTGTATTATGACAAAAACAAAGAAATGGGTGAAACATTCAACATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCAGATATGTTATCACTATTGGTTCAGTGGAGCCAAAAGAACATGATTGAGAAACTTACATACAGTGAAGAAGTGCAGTGTACTGTTTTGGAAGTCAAGAAAATTGAGGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTATCTGGAATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACGCCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCAATGGGTATCAAGATCACTGCCCAGGGACTTGAACATGTCGTTGCTGGCGCTAGTTTATATGTGGTGAAGAGTGATGATGACTTGGAATATTTTAAAAATGCGGCCTTGGAAGACGTGGAGTCAGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTCCAAGCATCTACCCTTGGCTCATTGGAAGCATTACTGGAGTTTTTGAAAACTCCAGAAGTGAATATTCCTGTTAGTTCTATAAGCATAGGTGATATACATAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATTCTACTATATTGGCGTTTGATGTCGAAGTCACCCCTGAAGCTAAGGAACTTGCAGATAAATTGGGTGTGAAAATTTTTATTGCCGATATTATTTATCGTCTATTTGATCAATTTAAGGCTTACATGGCCAACATTAAGGAGGAGAAAAAGAAAGAATCTGTTGACGAGGCAGTCTTCCCATGCGTTCTGAAGATCATACCAAATTGTGTTTTCAACAAGAAGGATCCAATTCTTTTGGGAGTTGATATCCTTAAAGGCATTTTAAAGATTGGAACTCCAATTTGTATTCCTTCCCAAAATTTCATTGATATTGGCTGCATCGTCTCCATTAAGATTAACAATAAACCAGTTGATAGTGCGATAAAAGGGCAGCAAGTAGCCATTAAGATTGTAGGCAGAAATTCTGAGGAACAGCAGAAAATGTTTGGGAGGCATTTTGGGATTGAGGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATGTTCTCAAAACTTATTATCGAGATGATCTGTCTATGGAGCTACGTAAGCTGTTGGTGAACTTGAAGAGGATTTTCAAGATACAATGA 1350 0.3874 MEQQSKDVLDYFDTKVTQIVTEFKEQGLNTELYYDKNKEMGETFNIVPTSAISGEGIPDMLSLLVQWSQKNMIEKLTYSEEVQCTVLEVKKIEGHGTTIDVVLVNGVLHEGDQIVVSGMQGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHVVAGASLYVVKSDDDLEYFKNAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSSISIGDIHKKDVMKASVMLEKKREYSTILAFDVEVTPEAKELADKLGVKIFIADIIYRLFDQFKAYMANIKEEKKKESVDEAVFPCVLKIIPNCVFNKKDPILLGVDILKGILKIGTPICIPSQNFIDIGCIVSIKINNKPVDSAIKGQQVAIKIVGRNSEEQQKMFGRHFGIEDELVSHISRRSIDVLKTYYRDDLSMELRKLLVNLKRIFKIQ* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2152 449 Gene3D - 1 79 IPR027417 -
Mal1g2152 449 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 182 312 IPR036925 -
Mal1g2152 449 PANTHER PHOTOSYSTEM II PROTEIN D1 1 449 - -
Mal1g2152 449 Gene3D Translation factors 312 449 - -
Mal1g2152 449 Pfam Translation-initiation factor 2 189 298 IPR023115 -
Mal1g2152 449 Pfam Elongation factor Tu domain 2 96 174 IPR004161 GO:0005525
Mal1g2152 449 Gene3D Translation factors 80 200 - -
Mal1g2152 449 CDD aeIF5B_II 81 183 - -
Mal1g2152 449 Gene3D - 201 305 IPR036925 -
Mal1g2152 449 SUPERFAMILY Translation proteins 316 448 IPR009000 -
Mal1g2152 449 SUPERFAMILY Translation proteins 79 176 IPR009000 -
Mal1g2152 449 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 449 IPR015760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2152 Mal-Chr1 28346051 28348330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2152 1 449 Eukaryotic Initiation Factors Gene Family AT1G76810 75.947 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2152 K03243 - gmx:100814640 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2152 1 28346051 28348330 Mal1g2152 1 28346051 28348330 ECH