Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2150 ATGGGGAAGAAGAAGCCAGCAATTCGCGACGACGAGAATCCGCCGCCGCAACAAGGCGGTGGGAAATCGAAGAAGAAGGCTCCGGTCATCGACGATGATGAATATTCTATCGGAGTGGAGGTGTCGGAGGAGGCAGCTCCGGTGACGGTAGCGGAAGAGAAACCTGGGAAAAAGAAAGGTAAGAAAGGTAACGCTAAATCGAAAAAAGATAATGCTGATGATTTTGATGATGTTGTTGATGATGATGATGATGTGAGTGAAACTGTTTTTGCTGGGAAGAAAAAGGGGAAATCGAAAAAAAGTGGTGGTGGAAGTGTGTTTACTTCTGGATTTGGTGTGCTTGGGGATGAGGAGGATGTTGATAATGATGATGATGTGAAATCAGAGTTAACCGGTGAGGGCGATGACGAAGAGGATGAATCGGTTGTTAGTTTTACTGGGAAGAAGAAATCTTCAAAGGGTTCGAAGAAAGGGGGTGGTGGAAGTGTGTTTAGTTCTGCTGCTGGTTTTGGATTGCTTGGGGACGAGGAAGATGCTGATAATGATGATGGCGATGAGGATGAGGATGAACCAGTTGTATTTTCAGGGAAGAAGAAATCCTCAAAGGGTTCGAAGAAAGGGGGAAGTAGTTTGTTCAGTGCATTAGATGAGAATGATGATGGAGAGGAGGAGAGTAAGAATGAAAAGGTTGAAGATGAGGATGATGAACCAATCACTTTCTCGGGTAAGAAAAAGAAGTCATCGAAGGGTTCGAAGAAGGCGGGTGGTTCATTGAGTAAAGCTATTCCGGAGGAGGATAGTGTTTCTGTATCCGAGTCTGCTAAAGGTGGCGACGATGGAAAAGATGAGGATGATGTTTCTTTTGCATTTACTGGTAAAAAGAAGTCCTCTAAAAAGAAAAGTGGTGGTGCTGCTGCGAAAGTGAGTGATGAAATTGAGTTTGGGAATGAAAGTGTAGATGTTGTTGAGGCTGAGAAGCCTAGTGTTGACAATGGTAATATAAGTAAGAGTGAAGAGGTCGTTGCAACTTCCAAAAATAAGAAGAAGAATAAGAAGAAGAGTGGGAGGACTAAAGAAGAGGAGGATGATTTAGATAAGATTCTTGCAGAGCTTGGTGAAACCCCTGCTACAGCACAACCTGCTGCGGCTCCTCCTCAGCAGGATGATAAAGTTCAACTGGTTCCTGATGTAGGTTCTGCCCCTGGTGCTTCAGGAGAAAAGGAGGGAGAAGACGAGACTGTAGAGTCAGCTGCGGCAAAAAAGAAGAAAAAGAAGAAGGAAAAGGAAAAGGAGAAGAAGGCAGCTGCAGCAGCAGCCGGAAGTGCACCGGTAATTGAAGCTGTCGAAGAGAAAGCTGAGGCAATTGAACCAAAGAAAAATGATCTGAAGACCAAAGCGGCTGACAAAAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAACTTCTGGCTCGAAGAAAAGAGGCTGAAGAAAGAAAGAAAAAGGAAGAGGAAGAGAAGCTTAGGAAAGAAGAAGAGGAGCGACTGAGGCTAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAAAAACTCCTGAAAAAGAAGCAGGAAGGTAAATTGTTAACTGGTAAGCAGAAAGAAGAAGCCCGACGTTTGGAGGCAATGAGGAGGCAGATTCTCAGTAGCACGGGGGGTGTGACTCTTCCTGGTGGGGACACTGGTGCACCAGCCAAAAAACCCATTTATCAGACAAAGAAAGGGAAATCAACTAATCGAAATCATAATGGTGCCGCTGTTGTCAAGACAGATGAAAGTGATGAAGCAACGGAAACAACCGCTGATTTAGATTCAGAGGAGCCGGAAAAGGTTGAAGAAGTGGAGTCGGTGCAGATGGAGGACAAAGTTGAACTTCCTGAAGCTGTTGAAGAGGATGCAGTGGAAGAAGATGATGTTGAGGATGAATGGGACGCAAAAAGCTGGGATGATGTCAATCTGAATGATAAGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACCGATTGTCAAAAAAGAGATTAAAAATGGCATGCCTTCTAAAAATGCTGGTGCTACAAATAAAACTGTTTCGAAGCCTGTGGCTGAAGAAACTGAAGATAGAAAACAGGCCAAAGTTGTGGTTGAGGACAAAAAGATAAAGTCCGATCCACAACACTCTGCTGTGCCTTCTAAGCCGAGTGATGGGAACCTTCGGTCGCCAATTTGTTGCATCATGGGTCATGTGGACACTGGCAAAACCAAGCTTCTGGATTGTATTAGAGGTACCAATGTTCAAGAAGGTGAGGCCGGTGGTATCACCCAACAGATTGGTGCTACATACTTTCCTGCTGAGAACATACGTGAAAGAACTAAGGAACTGAAAGCTGATGCAACACTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGCCACGAGTCATTCAATAACTTAAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACAGAATTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGACGCAGCAGTCTAGGGATGTTCAAAATGAGTTTAATATGAGGGTCACTCAGATTGTTACTCAGTTCAAGGAACAGGGGCTAAATACTGAATTGTATTACAAAAACAAAGAAATGGGCGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCAGATATGTTATTACTATTGGTTCAGTGGACCCAAAAGACCATGGCTGAGAAACTTACATACAGCGAAGAAGTGCAGTGTACTGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGCTGTTTTAGTTAATGGCGTACTTCATGAAGGAGATCAAATAGTTGTATCTGGAATGCAGGGTCCAATTGTTACCACTATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAGGAAATCAAAGCTGCGATGGGCATCAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGCGCTAGTTTATATGTGGTGAAGCCTGATGATGATTTGGAATATATTAAAAAAGCGGCTTTGGAGGATGTGGAGTCGGTCTTGAGCAGGATTGACAGGAGTGGCGAGGGGGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGAAGCATTACTGGAGTTTTTGAAAACCCCAGAAGTGAATATTCCTGTTAGTTCTATAAACATAGGCCCTGTACATAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATTCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGAACTTGCAGATGAATTGGGTGTTAAAATTTTTATTGCCGATATCATTTATCATCTATTTGACCAATTTAAGGCTTACATGGACAACATTAAGGAGGAGAAAAAGAAAGAATCTGCTGATGAGGCAGTCTTCCCATGCGTTCTGAAGATCTTACCAAATTGTGTCTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGATTGGAACTCCAATTTGTGTTCCTTCCCAAGAGTTCATTGATATCGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTATGCGAAGAAAGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAACAGCAGAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATATCCTCAAAACTAATTATCGGGATGATCTGTCTATGGAGGAATGGAAGCTGGTGGTTAAATTGAAGAGTCTGTTCAAGATACAATGA 4017 0.4299 MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEVSEEAAPVTVAEEKPGKKKGKKGNAKSKKDNADDFDDVVDDDDDVSETVFAGKKKGKSKKSGGGSVFTSGFGVLGDEEDVDNDDDVKSELTGEGDDEEDESVVSFTGKKKSSKGSKKGGGGSVFSSAAGFGLLGDEEDADNDDGDEDEDEPVVFSGKKKSSKGSKKGGSSLFSALDENDDGEEESKNEKVEDEDDEPITFSGKKKKSSKGSKKAGGSLSKAIPEEDSVSVSESAKGGDDGKDEDDVSFAFTGKKKSSKKKSGGAAAKVSDEIEFGNESVDVVEAEKPSVDNGNISKSEEVVATSKNKKKNKKKSGRTKEEEDDLDKILAELGETPATAQPAAAPPQQDDKVQLVPDVGSAPGASGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAGSAPVIEAVEEKAEAIEPKKNDLKTKAADKKVPKHVREMQELLARRKEAEERKKKEEEEKLRKEEEERLRLEELERQAEEAKRRKKEKEKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILSSTGGVTLPGGDTGAPAKKPIYQTKKGKSTNRNHNGAAVVKTDESDEATETTADLDSEEPEKVEEVESVQMEDKVELPEAVEEDAVEEDDVEDEWDAKSWDDVNLNDKGAFADEEVDSEPEPIVKKEIKNGMPSKNAGATNKTVSKPVAEETEDRKQAKVVVEDKKIKSDPQHSAVPSKPSDGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMTQQSRDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMAEKLTYSEEVQCTVLEVKVIEGHGTTIDAVLVNGVLHEGDQIVVSGMQGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSSINIGPVHKKDVMKASVMLEKKREYSTILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICVPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDDLSMEEWKLVVKLKSLFKIQ* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2150 1338 MobiDBLite consensus disorder prediction 638 658 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 659 689 - -
Mal1g2150 1338 Gene3D - 1090 1194 IPR036925 -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 585 599 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 610 627 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 271 292 - -
Mal1g2150 1338 Gene3D Translation factors 969 1089 - -
Mal1g2150 1338 TIGRFAM small_GTP: small GTP-binding protein domain 751 875 IPR005225 GO:0005525
Mal1g2150 1338 Gene3D Translation factors 1201 1338 - -
Mal1g2150 1338 Gene3D - 741 968 IPR027417 -
Mal1g2150 1338 Pfam Elongation factor Tu domain 2 985 1063 IPR004161 GO:0005525
Mal1g2150 1338 SUPERFAMILY Translation proteins 1205 1337 IPR009000 -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 175 190 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 354 369 - -
Mal1g2150 1338 Pfam Translation-initiation factor 2 1076 1187 IPR023115 -
Mal1g2150 1338 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1338 IPR015760 -
Mal1g2150 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 747 1037 IPR027417 -
Mal1g2150 1338 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1338 - -
Mal1g2150 1338 Coils Coil 414 439 - -
Mal1g2150 1338 PRINTS GTP-binding elongation factor signature 866 875 IPR000795 GO:0003924|GO:0005525
Mal1g2150 1338 PRINTS GTP-binding elongation factor signature 830 841 IPR000795 GO:0003924|GO:0005525
Mal1g2150 1338 PRINTS GTP-binding elongation factor signature 814 824 IPR000795 GO:0003924|GO:0005525
Mal1g2150 1338 PRINTS GTP-binding elongation factor signature 750 763 IPR000795 GO:0003924|GO:0005525
Mal1g2150 1338 MobiDBLite consensus disorder prediction 216 231 - -
Mal1g2150 1338 CDD IF2_eIF5B 749 959 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 116 140 - -
Mal1g2150 1338 Pfam Elongation factor Tu GTP binding domain 750 958 IPR000795 GO:0003924|GO:0005525
Mal1g2150 1338 MobiDBLite consensus disorder prediction 449 556 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 708 733 - -
Mal1g2150 1338 CDD IF2_aeIF5B_IV 1209 1304 - -
Mal1g2150 1338 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 746 962 IPR000795 GO:0003924|GO:0005525
Mal1g2150 1338 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1071 1200 IPR036925 -
Mal1g2150 1338 Coils Coil 471 538 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 1 743 - -
Mal1g2150 1338 CDD aeIF5B_II 970 1076 - -
Mal1g2150 1338 MobiDBLite consensus disorder prediction 405 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2150 Mal-Chr1 28314018 28321660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2150 184 1338 Eukaryotic Initiation Factors Gene Family AT1G76810 65.596 0.0 1196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2150 K03243 - gmx:100814640 1574.68