Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2133 ATGACAGGATTTTGGAGTGTGTTTTGTGATGAATCTGGTTGTTCAAATCCTTGCGGTTACTATGATGTTAAGTTTCTCATTGATCCTTCCACATGTATCAACCATTTGTTGATATCTTCTTTTGATCTGTTACTGCTCATCATGCTACTTTTTATAGTGATGATACAGAAGTCATCATTAAAACCGTATCAGGATCTTATACATCGACAAAGATATTCAAATTTGCAACTAGTTTCTGCTATAGCAAATGGTGCTCTCGGGTTAGTGCATTTATTCTTCGGCATTTGGATTTTAGAAGAGAAGTTGAGGAAAAACCAAACTGCGTTGCCTCTTGACTTGTGGTTGCTGGAATTAATTCAGGGATTAACATGGTTGTTAGTTGGTTTAACATTAAGTCTTAAGTTTAAACAACTTCCAAGAGCATGGTTAAGGCTTTTTTCTGTTCTAATTTTCTTAGTTTCTGGTATAAACTGCGCTATATCATTGCTTTATGCATTCAGTAGTATGCAACTGTCCCTCAAGGTAGCATTAGATGTCCTATCTTTTCCAGCAGCAGTTTTATTGCTACTATGCACGTACAAGGAATCTAAGTATAGGGACGGTGACAGAGAAATCGATGAAAGCCTTTACGCTCCTTTAAATGGTGAGTCGAATAAAAATGATTCTGTTTCCCGTGTGACGCTGTTTGCCAAAGCTGGAGTTTTTAGTCGGATGTCATTTTGGTGGTTGAATTCATTGATGAAGAGAGGTAAAGAGAAAACACTTGAGGACGAAGATGTGCCGAAGTTGAGGGAGGAAGATAGAGCAGAAAGTTGTTATTTGCTGTTTCTAGAGCAATTGAACAAGCAGAAACAGAAGGATCCATCCTCACAACCATCTGTTTTGAGGACAATGGTTTTATGCCACTGGAGAGAAATTTTGATATCTGGATTCTTTGCATTGCTTAAGGTACTTGCACTATCTTCTGGACCTATGCTTCTGAATTCCTTTATATTAGTCGCCGAAGGTTTTGAAAGTTTCAAATATGAAGGTTTTGTATTGGCCATAGCACTTTTCTTTATAAAAATTATAGAATCTCTATCACAAAGGCAGTGGTATTTCCGCTCGAGACTCATCGGTCTCAAAGTTAGGTCTCTGCTAACTGCTGCGATTTATAAAAAGCAACTGAGGTTATCCAATTCTGCTAGATTGACGCACTCTGGCGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATCGGAGAATTTCCTTACTGGTTTCACCAAACATGGACTACTAGCTTCCAGCTATGTATCTCGTTGGTAATACTTTTCCGCGCCGTTGGGCTAGCTACAATTGCCTCCTTGGTAGTTATAGTTATCACAGTACTTTGCAATGCACCACTTGCAAAGTTACAACACAAGTTTCAAAGCAAACTTATGGTGGCACAAGATGCGAGATTGAAGGCTACTTCTGAAGCTCTTGTGAATATGAAGGTGCTGAAGTTATATGCATGGGAAACCAGCTTTAAAAATTCTATAGAAGGATTAAGAAATGAGGAGCTCAAATGGGTTTCTGCAGTGCAATTGAGAAGGGCATATAACACATTTCTCTTTTGGTCGTCACCGGTTTTGGTCTCTGCTGCTTCGTTCGGAGCGTGCTATTTTCTTAACATTCCTTTACATGCAAATAACGTTTTCACTTTTGTAGCAACTTTACGCCTTGTTCAAGATCCGATTAGATCCATCCCGGATGTTATTGGGGTGGTCATTCAGGCAAAAGTTGCATTTGCTCGGATTCTAAAATTCCTTGAGGCACCAGAACTACAGAGTGAAAATGTTCAGAAGAGGTGTTCTGGTGGAAATATGAGGGGGTCAATTTCAATCAAATCGGCTGAATTTTCATGGGAAGATAATAATGTATCTAAGTCAACATTGAGAAATATAAATTTGGAAGTTAGATCTGGACAAAAGGTAGCGATTTGTGGAGAAGTTGGCTCAGGCAAATCAACTCTCTTAGCAGCAATTCTAGGAGAAGTTCCTAACACTCAAGGGAAAATTGACGTTTATGGAAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAAACAGGTACAATAAGGGATAATATATTGTTTGGATCACCTATGGATGCTCAAAAATATCAGGAAACGCTTCAGAGGTCTTCACTAGTGAAAGATCTTGAGTTACTTCCCCATGGCGATCACACTGAAATAGGAGAGAGAGGGGTTAACTTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCTCGTGCTCTTTATCAGAATGCCGATATATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACAAACAGCTACAAATTTGTTTAATGAATACATTATGGAAGGGCTTTCTGGGAAGACTGTTTTGCTTGTGACTCATCAAGTTGACTTCCTTCCGGCATTTGATTTTATTTTGCTGATGTCAGACGGGGAAATCCTACAAGCCGCTCATTATCACCATTTATTGACCTCAAGCAAAAATTTTCAAGACCTTGTGAATGCTCACAAAGAGACTGCTGGTTCGGACCGGCTTATGGATGTTACTTCTTCTGAAAGACATTTAAATTCTGCTAAAGAGATTAGAAAAACATATGTGGAGAAGGAAAGGCAATTTGAAGCACCGAAAGGCGATCAATTGATTAAGCAAGAAGAGAGAGAGATAGGAAACCGAGGGTTTAAGCCTTACTTACAGTATCTGAATCAAAACAAAGGATATGTATACTTTTCCGTGGCTTCTATTTCTCACATTATATTTGTGATTGGTCAGATATTGCAAAACTCCTGGATGGCTGCTAATGTTGACAATCCTAAAGTCACCACTTTGAGATTGATTCTAGTTTACTTGTTGATTGGAGTTACTTCGACAGTATTCTTATTGATGAGAAGTCTTTTTACAGTTGCTTTGGGTCTTCAATCTTCAAAGTCTTTGTTTTTACAACTACTAAACTCTCTTTTCCGTGCACCTATGTCGTTTTATGATTCCACGCCTTTGGGACGGATACTTAGTAGGGTCTCTTCTGATCTCAGCATTGTTGATCTTGATGTTCCATTTGGTCTTCTTTTTGCTGTGGGAGCAACTACCAATTGTTATGCAAATCTAACTGTTTTAGCAGTAGTTACTTGGCAAGTCTTATTTGTCTCCATACCGATGATTTATTTCGCACTGCGCTTGCAGGGATACTACTTTGCTACTGCAAAAGAACTGATGCGGATGAATGGCACAACAAAATCCTTTGTAGCAAACCATCTTGCTGAATCTGTGGCTGGTGCTGTGACAATAAGGGCTTTCGAAGAGGAAGATCGTTTTTTTGTAAAGAATCTTAGTTTAATTGATATCAACGCTACTCCTTTCTTTCATAGTTTTGCTGCAAATGAGTGGTTGATTCAACGGTTAGAAACAGTAAGTGCAGTTGTTCTAGCATCAGCTGCACTTTGCATGGTTATACTTCCACCCGGAACATTCTCCTCTGGATTTATTGGAATGGCTCTCTCTTATGGTCTTTCACTTAACGCTTCCTTAGTATTTTCAATTCAAAACCAATGCAATATAGCAAATTACATAATATCAGTGGAGAGGCTGAATCAATATATGCATGTACCAAGTGAGGCTTCAGAAATAATAGAAGGAAATCGTCCTCCAGTGAATTGGCCAGTTGTTGGTAGAGTAGAAATAAAGGAACTACAGATACGGTATAGGCCTGATGCGCCACTAGTACTTCGTGGGATCACATGTACATTTGAAGGAGGACACAAAATTGGTATAGTTGGTCGCACCGGCAGTGGCAAGACCACTCTTATTGGCGCTTTATTTCGTCTAGTGGAGCCTGCGGGTGGAAAAATCATTGTTGATGGCATTGACATCGGTTCCATTGGACTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAGGAACCTACTCTTTTTAATGGAACCGTCAGATACAATTTGGATCCCTTATTTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTCCAAGAGAAAGAAGGTGGTTTAGACTCATCAGTTGTTGAAGATGGGGCAAATTGGAGCATGGGACAACGACAGTTGTTCTGTTTGGGTCGTGCTTTGCTGAGGAGAAGTCGGATATTGGTTCTCGATGAAGCAACCGCATCAATTGATAATGCAACTGACTTGATTCTACAGAAAACCATTAGGACTGAGTTTGCTGATTGTACGGTAATCACGGTAGCTCATAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTTCCATTAGTGATGGAAAACTAGTAGAGTATGATGAGCCAATGAACTTGATGAAGAAAGAAGGATCTTTGTTTGGGAAGCTTGTCAAAGAATATTGGTCTCATTTTCAATCTGCAGAGTCTCATTAA 4443 0.3955 MTGFWSVFCDESGCSNPCGYYDVKFLIDPSTCINHLLISSFDLLLLIMLLFIVMIQKSSLKPYQDLIHRQRYSNLQLVSAIANGALGLVHLFFGIWILEEKLRKNQTALPLDLWLLELIQGLTWLLVGLTLSLKFKQLPRAWLRLFSVLIFLVSGINCAISLLYAFSSMQLSLKVALDVLSFPAAVLLLLCTYKESKYRDGDREIDESLYAPLNGESNKNDSVSRVTLFAKAGVFSRMSFWWLNSLMKRGKEKTLEDEDVPKLREEDRAESCYLLFLEQLNKQKQKDPSSQPSVLRTMVLCHWREILISGFFALLKVLALSSGPMLLNSFILVAEGFESFKYEGFVLAIALFFIKIIESLSQRQWYFRSRLIGLKVRSLLTAAIYKKQLRLSNSARLTHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVGLATIASLVVIVITVLCNAPLAKLQHKFQSKLMVAQDARLKATSEALVNMKVLKLYAWETSFKNSIEGLRNEELKWVSAVQLRRAYNTFLFWSSPVLVSAASFGACYFLNIPLHANNVFTFVATLRLVQDPIRSIPDVIGVVIQAKVAFARILKFLEAPELQSENVQKRCSGGNMRGSISIKSAEFSWEDNNVSKSTLRNINLEVRSGQKVAICGEVGSGKSTLLAAILGEVPNTQGKIDVYGKFAYVSQTAWIQTGTIRDNILFGSPMDAQKYQETLQRSSLVKDLELLPHGDHTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAQTATNLFNEYIMEGLSGKTVLLVTHQVDFLPAFDFILLMSDGEILQAAHYHHLLTSSKNFQDLVNAHKETAGSDRLMDVTSSERHLNSAKEIRKTYVEKERQFEAPKGDQLIKQEEREIGNRGFKPYLQYLNQNKGYVYFSVASISHIIFVIGQILQNSWMAANVDNPKVTTLRLILVYLLIGVTSTVFLLMRSLFTVALGLQSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLLFAVGATTNCYANLTVLAVVTWQVLFVSIPMIYFALRLQGYYFATAKELMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFVKNLSLIDINATPFFHSFAANEWLIQRLETVSAVVLASAALCMVILPPGTFSSGFIGMALSYGLSLNASLVFSIQNQCNIANYIISVERLNQYMHVPSEASEIIEGNRPPVNWPVVGRVEIKELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKTTLIGALFRLVEPAGGKIIVDGIDIGSIGLHDLRSRFGIIPQEPTLFNGTVRYNLDPLFQHSDQEIWEVLGKCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLSISDGKLVEYDEPMNLMKKEGSLFGKLVKEYWSHFQSAESH* 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2133 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1461 IPR027417 -
Mal1g2133 1480 SUPERFAMILY ABC transporter transmembrane region 919 1214 IPR036640 GO:0005524|GO:0016021
Mal1g2133 1480 Pfam ABC transporter 1251 1399 IPR003439 GO:0005524
Mal1g2133 1480 CDD ABC_6TM_ABCC_D2 920 1209 IPR044726 GO:0140359
Mal1g2133 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 846 IPR003439 GO:0005524
Mal1g2133 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1468 IPR003439 GO:0005524
Mal1g2133 1480 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Mal1g2133 1480 Gene3D - 597 868 IPR027417 -
Mal1g2133 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 928 1197 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2133 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2133 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 846 IPR027417 -
Mal1g2133 1480 SUPERFAMILY ABC transporter transmembrane region 295 600 IPR036640 GO:0005524|GO:0016021
Mal1g2133 1480 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Mal1g2133 1480 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 72 1480 - -
Mal1g2133 1480 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Mal1g2133 1480 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 72 1480 - -
Mal1g2133 1480 Gene3D - 1218 1469 IPR027417 -
Mal1g2133 1480 Gene3D ABC transporter type 1, transmembrane domain 883 1215 IPR036640 GO:0005524|GO:0016021
Mal1g2133 1480 CDD ABCC_MRP_domain1 622 823 - -
Mal1g2133 1480 SMART AAA_5 1260 1452 IPR003593 -
Mal1g2133 1480 SMART AAA_5 650 823 IPR003593 -
Mal1g2133 1480 CDD ABCC_MRP_domain2 1232 1452 - -
Mal1g2133 1480 Pfam ABC transporter transmembrane region 307 572 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2133 1480 Pfam ABC transporter transmembrane region 922 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal1g2133 1480 Gene3D ABC transporter type 1, transmembrane domain 295 596 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2133 Mal-Chr1 27914086 27919995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2133 618 847 Calmodulin-binding Proteins AT2G36910 31.707 1.65e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2133 K05666 - gmx:100811468 2441.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2133 1 27914086 27919995 Mal1g2133 1 27914086 27919995 ECH
Mal8g3720 8 107490186 107496348 Mal1g2133 1 27914086 27919995 PCT