Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2117 ATGGAAGAGAAACAAGTTGTGTTGTCATCATTTGCTGTTTGGGCAGGGTTGAATCTGGGGGTGGTAATATGGGATGGTGTTAAACGTTATAATCAGTCTAAGCAGATTCATGAGGATCAGCTTGTGATGGAGCTCATGAAACTAGTCACTAATGGGAAGGATTATGATGTCACATTTGATAAGTTTCCTTATTACTTAAGGGAAAAAGTCAAAATTTCGTTGGCAAGTGCTGGATATGTTCATTTGACACAACATCGTTTGTCGAAGCACACGAAGTACCTTTCGCCAGTAAGCCGAGCTATTTTGATTTCTGGACCTGCAGAATTTTATCAGCAAAAGCTTGCCAAAGCTTTAGCACGTTACTTTGAATCAAAGCTCCTGATTCTAGATATATATAACTTCGCTTGGGAGGTAGTTTTTTTACATCTTTTTTACTTTACTTTCTCTGGTTTTTGTGTTATATATGTAATTATACCTTTCATGTTTTCCTTGTACAGATGCAGCACAAATACGGATGTCAAGTTCATATTTGATGTGACTCTGCAGTGCGTGTCTGGTTTATTTGGTTCCCTGTCAATCCTCGCTTCAAAAGGCGTAATTAGAGCTCCTGTGACGTGCACAAGCCGCGTCTGTTTTGATGAAAAGCGTCTCCTAGATTCACTCTACAAGGTCTTGGTTTCCATATTGGAAACTGATTCTGTTATCTTGTACATCAAGGATGTTGAGAAGGACTTTCGTCTATATCCTAGGATGTACAGTTTGTTCCAAAAGCTTTTAGATAAACTTTCAGGGTCAGTGTTGATACTTGGTTCACGACCTTATGATTCCGAAGATAAATGTGGAGAAGTTGATAAAAAGCTCACTATGTTATTCCCTTGCAACATTGAGATCAAACCACCTCAAGATGAGACTCGTCTCAAAATCTGGAAAGTCCAACAAGAAGAGGTCACTAATAAGACACAGTTGAACCGCATTTCTGAAGTGCTTGCAGAAAATGACATTGATTGTGATGACTTGAACACTATCGGCCATACTGACATTATGCTACTCAGTAATCACATCAAAGAGATTGCCGCATCTGCAATTTTTTATCAATTGATGGATAACAATAATCCAGAGTACCGAAACGGAAAGCTAATTATATCAGCCGAGAGTTTGTGCCATGTATTGAGTGTGTTCCAGAAGGGTGAAAGTAGCGACAAGGATAATACGAAGACTAAAAAAGAATCAAAGAAAGTTCATCCTGACAATGCCTTTGAGAAGTCCATAAGACAAGAGCTTATCTCTGCAAATGAGATAGGGGTGACTTTTTCAGATATTGGTGCATTGGATGATGTTAAAGAATCACTTCAAGAAGCGGTTATGTTTCCCCTTAGAAGACCAGATCTATTCAAAGAGGATGGGGTTCTGAAGCCGTGTAAAGGTGTATTACTTTTTGGACCTCCCGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGACGCTGGAGCAAGTTTCATCAATGTCTCTTCATCCACAATCGCTTCATGTTGGTTTGGAGAAGCTGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCAAAGGTTGCCCCAACTATTATTTTCATTGATGAAGTTGATAGCATGCTTGGGAAGCGGTCTGGCAATGATGACAAAACAATGAGAAGGATTAAAAATGAATTCATGTCCCACTGGGATGGACTATTGTCAAAACCTGTCGAAAAAGTTATTGTTCTTGCTGCAACCAACATGCCATTTGACCTTGATGAAGCAGTTATAAGACGGTTTCAGCGCAGGATAATGGTTGGTCTTCCGTCTGCTGAGAACAGGGAAATGATCTTGAAAACTATTCTAGCTAAGGAAAAACATGAAGATATAGACTTCAAAGAGCTTTCAACTATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCATTACTGCAGCTTATACCCCCATGAAGGAGCTAATGCAACAGGAGAAGGAAAAAGAAATGGAAAAGAAGAAAAAGGATGCAGAAATTGAAAAATCAGAAGACGCTTCCAATGCTAAAGAAGAAGATGAAAATGATCAAGTGATTTCCCTCAGGCCTCTAAACATGGAAGACATGAGGCAGGCAAAGAATAAGGTGGCAGCAAGTTTTGCTGCAGAAGGATGGAATATGAAAATGCTGGAGCAGTGGAATAATTCGTATGGAGAAGGAGGTTCAAGGAAGAAAGAAGAGCAGCTCAGTTATTTCCTTTAG 2256 0.3954 MEEKQVVLSSFAVWAGLNLGVVIWDGVKRYNQSKQIHEDQLVMELMKLVTNGKDYDVTFDKFPYYLREKVKISLASAGYVHLTQHRLSKHTKYLSPVSRAILISGPAEFYQQKLAKALARYFESKLLILDIYNFAWEVVFLHLFYFTFSGFCVIYVIIPFMFSLYRCSTNTDVKFIFDVTLQCVSGLFGSLSILASKGVIRAPVTCTSRVCFDEKRLLDSLYKVLVSILETDSVILYIKDVEKDFRLYPRMYSLFQKLLDKLSGSVLILGSRPYDSEDKCGEVDKKLTMLFPCNIEIKPPQDETRLKIWKVQQEEVTNKTQLNRISEVLAENDIDCDDLNTIGHTDIMLLSNHIKEIAASAIFYQLMDNNNPEYRNGKLIISAESLCHVLSVFQKGESSDKDNTKTKKESKKVHPDNAFEKSIRQELISANEIGVTFSDIGALDDVKESLQEAVMFPLRRPDLFKEDGVLKPCKGVLLFGPPGTGKTMLAKAIANDAGASFINVSSSTIASCWFGEAEKNVRALFSLAAKVAPTIIFIDEVDSMLGKRSGNDDKTMRRIKNEFMSHWDGLLSKPVEKVIVLAATNMPFDLDEAVIRRFQRRIMVGLPSAENREMILKTILAKEKHEDIDFKELSTMTEGYSGSDLKNLCITAAYTPMKELMQQEKEKEMEKKKKDAEIEKSEDASNAKEEDENDQVISLRPLNMEDMRQAKNKVAASFAAEGWNMKMLEQWNNSYGEGGSRKKEEQLSYFL* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2117 751 Pfam ATPase family associated with various cellular activities (AAA) 476 605 IPR003959 GO:0005524|GO:0016887
Mal1g2117 751 MobiDBLite consensus disorder prediction 663 696 - -
Mal1g2117 751 ProSitePatterns AAA-protein family signature. 578 597 IPR003960 GO:0005524|GO:0016887
Mal1g2117 751 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 138 - -
Mal1g2117 751 Gene3D - 434 606 IPR027417 -
Mal1g2117 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 653 IPR027417 -
Mal1g2117 751 Pfam AAA+ lid domain 627 670 IPR041569 -
Mal1g2117 751 Coils Coil 657 691 - -
Mal1g2117 751 Gene3D - 607 686 - -
Mal1g2117 751 CDD AAA 474 606 - -
Mal1g2117 751 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 201 409 - -
Mal1g2117 751 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 411 751 - -
Mal1g2117 751 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 138 - -
Mal1g2117 751 MobiDBLite consensus disorder prediction 663 702 - -
Mal1g2117 751 SMART AAA_5 472 608 IPR003593 -
Mal1g2117 751 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 411 751 - -
Mal1g2117 751 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 201 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2117 Mal-Chr1 27667974 27673476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2117 435 713 Calmodulin-binding Proteins AT3G56690 36.620 3.74e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2117 - - cam:101506297 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2117 1 27667974 27673476 Mal1g2117 1 27667974 27673476 ECH