Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2116 ATGATTGAACAGAAGCAAGTTTTGTTTTTAGCAGCACTAGGTGTTGGGGTTGGGTTAGGTGTGGGACTTGGAACATGGGTCGGTGAGAAAAATGTTTTGTTGCCAGTATTGAGTGTTCTGGTTGGTTTGATTGCAGGACTTGGAATTTGGATTGGTTTTGGAGGTGATTATGAGAATAATCATATTTCTGAGAATCAAATTGTGAAGGGGCTTAAGAAACTAGTCATTGATGGAAAGGATAGTAAAGTCACATTTGATGACTTTCCTTATTACTTAAGTGAAAAAAACAAAATTTTGTTGACAAGTGCTGGATATTTTCATTTAAGAAAACATGACTTATCCAACCACACGAGGAACCTTTCACCAGTAAGCCGAGCTATTTTGCTTTCTGGACATGCAGAACGTTATCATCATAAGCTTGCCAAAGCTTTAGCACATTGCTTTGAATCGAAGTTACTGTCTCTAGATATTGCTCAATTCTCTTTGAAGATGCAGGGAAAATATGGATGTCCTACAAAAGAACCATATTTTAAAAGGTCCATATCTGAGGCGACTCGGGAGTGTGTGTCTGGTTTGTTTAGATCCCTATCAATCCTCCCTTCAACAGGCGCGATTAGAGGGACTAAAGCTCCTTTGAAGTCCACAAGCCGCTACTGTTTTGATGAAAAGCTTTTCCTAGATTCACTCTACAAGGTCTTGGTTTCTATATCAGAAGTTGGTTCTGTTATTTTATACATCAAAGATGTTGAAAAGATCTTCCTTCAATCACCAAGGATGTACAGTTTGTTCCAAAAGCTATTTAATAAACTTTCAGGATCAGTGTTGATACTCGGTTCCAGGCCTTATGATCTAAAATATAAATGTATAGAAGTCGATGTAAAACTCACCGTGTTATTCCCTTACAACATTGAGATCAAACCGCCTCAAGATGAGACTCGTCTCAAAACATGGAACGACCAACTAAAAAAGGCCATGAAAAAGACTGAGTTGATAGATTACACCATACGCATTGCTGAAGTTCTTAAAGCAAATGACGTTGATTGTGATGACTTGGATACTATCGGCCATAGTGACATGAGGCGACTCAGTAATCACACTGAAGAGATTGTGGCATCTGCAATTTTTTATCACTTGAAGGATACCAAAAATCCAGAGTACCGAAATGGAATCCTAATTATATCGGCCAAGAGTTTGTGCCATGTATTGAGTCTGTTCCAGGAGGGTGAAAGTAGCGAGAAGGACAGTAAGAATGCTAAAAAAGAATCAAAAAAGGATGACCGCAGGAAAGAAAAACCAAAAGAGTCAAAGAAAGACGGTGATATTAAATCTTCTACAAAAGCAGATAAAGTTCGTCCTGACAATGCTTTTGAGGAATGCATAAGACAAGAGCTTATCCCTGCAAATGAGATAGAGGTGACTTTTTCGGATATTGGTGCTTTGGATGATATTAAAGAATCACTTCAAGAAGCGGTTATGCTTCCCCTTAGAAGACCAGATCTATTCAAAGCTGATGGGGTTCTGAAGCCATGTAAAGGTGTATTGCTTTTTGGACCTCCTGGTACAGGAAAGACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTCTCTCCGTCCACCATTACTTCAATGTGGCAAGGACAATCTGAAAAGAACGTCCGAGCTCTATTTTCGCTTGCGTCAAAGGTTGCCCCAACTATTATTTTCATTGATGAAGTTGACAGCTTGCTTGGACAGCGGTCTAGCTTTCATGAGCACAACTCAATGAGAAGGGTTAAAAATGAATTCATGTCCCGTTGGGATGGACTATTGTCAAAACCTGATGACAAAATTATTGTTCTTGCTGCAACCAACATGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAGCGCAGGATCATGGTTGGTCTTCCGTCTGCTGAAAACAGAGAAACAATCTTGAAAACTGTTCTAGCTAAGGAAAAATATGAAGATATGGACTTCAAAGAGCTTTCAACTATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCATGACTGCAGCATATCGCCCCCTTAAGGAGCTAATGCAACAGGAGAAGGAAAAAGAAATGAAGAAAAAGGTGGCGGAAGTTGAAATCTCAGAAGATGCTTCCAATGCTACCGAAGAAGATAAAGAAGATCAAGTGATTTCCCTCAGGCCTTTAAATATGGAAGACATGAGACAGGCAAAGAATAAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCAATAATGAACAGGTTGAAGGAATGGAATGATTTGTTTGGAGAAGGAGGTTCAAGGAACAAAGAGGAGCAGCTCAGTTATTTCTTTTAG 2364 0.3947 MIEQKQVLFLAALGVGVGLGVGLGTWVGEKNVLLPVLSVLVGLIAGLGIWIGFGGDYENNHISENQIVKGLKKLVIDGKDSKVTFDDFPYYLSEKNKILLTSAGYFHLRKHDLSNHTRNLSPVSRAILLSGHAERYHHKLAKALAHCFESKLLSLDIAQFSLKMQGKYGCPTKEPYFKRSISEATRECVSGLFRSLSILPSTGAIRGTKAPLKSTSRYCFDEKLFLDSLYKVLVSISEVGSVILYIKDVEKIFLQSPRMYSLFQKLFNKLSGSVLILGSRPYDLKYKCIEVDVKLTVLFPYNIEIKPPQDETRLKTWNDQLKKAMKKTELIDYTIRIAEVLKANDVDCDDLDTIGHSDMRRLSNHTEEIVASAIFYHLKDTKNPEYRNGILIISAKSLCHVLSLFQEGESSEKDSKNAKKESKKDDRRKEKPKESKKDGDIKSSTKADKVRPDNAFEECIRQELIPANEIEVTFSDIGALDDIKESLQEAVMLPLRRPDLFKADGVLKPCKGVLLFGPPGTGKTMLAKAIANEAGASFINVSPSTITSMWQGQSEKNVRALFSLASKVAPTIIFIDEVDSLLGQRSSFHEHNSMRRVKNEFMSRWDGLLSKPDDKIIVLAATNMPFDLDEAIIRRFQRRIMVGLPSAENRETILKTVLAKEKYEDMDFKELSTMTEGYSGSDLKNLCMTAAYRPLKELMQQEKEKEMKKKVAEVEISEDASNATEEDKEDQVISLRPLNMEDMRQAKNKVAASFAAEGSIMNRLKEWNDLFGEGGSRNKEEQLSYFF* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2116 787 CDD AAA 511 644 - -
Mal1g2116 787 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 29 208 - -
Mal1g2116 787 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 211 786 - -
Mal1g2116 787 Pfam ATPase family associated with various cellular activities (AAA) 513 643 IPR003959 GO:0005524|GO:0016887
Mal1g2116 787 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 211 786 - -
Mal1g2116 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 714 IPR027417 -
Mal1g2116 787 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 29 208 - -
Mal1g2116 787 Coils Coil 695 715 - -
Mal1g2116 787 MobiDBLite consensus disorder prediction 410 450 - -
Mal1g2116 787 Gene3D - 645 750 - -
Mal1g2116 787 Gene3D - 471 753 IPR027417 -
Mal1g2116 787 Pfam AAA+ lid domain 665 708 IPR041569 -
Mal1g2116 787 SMART AAA_5 509 646 IPR003593 -
Mal1g2116 787 ProSitePatterns AAA-protein family signature. 616 635 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2116 Mal-Chr1 27657056 27662848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2116 449 749 Calmodulin-binding Proteins AT3G56690 36.482 9.64e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2116 - - cam:101506297 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2116 1 27657056 27662848 Mal1g2116 1 27657056 27662848 ECH