Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2108 ATGTCTGAGGATTGGGATTTGTTTGCCATCGTTCGAAGCTGCCAATCAAGCACCAATACAACCACAACAGAAAATTCATTTACCACAACCAATACTATACCATCTTCCATTACCACTTCTAATTTCAAAGTAGAATTAGAATATGATGCATTTTCCTTTCCCAATGTAGTGCAACCTATAACCAATGAGCTTCAAGTCCAAGATCTAAACCAATCATTCACATCTTTTACCCCCACCAACACCACTACTACTATTACTAGTGGTCATGGTATCAATCCCAATTCCCCTCCTCATATTGCAAAATACATTGGACAACAACAACACCATTTTTCCCCTACTACTAATTCCTCTTCCATTTGGCCTCATTTTGTTCAAGAAGCCTCCACTTCTAGCTTCAACAAATTCCATAACCAACAACATAATCAACTACAATCAATTCAGAAACAAGAATTTCAAATACCCCAAAGCACCCAACCTCAAACACCTAGATCAAGAAAAAGAAAAAGTCAACAAGGGAAAATGGTGTGCCATGTAACCGCAGATAACCTCTCAACAGATTTGTGGGCATGGCGAAAATATGGACAAAAACCCATTAAAGGTTCTCCATATCCAAGGAACTACTACAGATGTAGCAGTTCCAAAGGTTGTACCGCGCGAAAGCAAGTCGAAAGAAGCAACACCGAAGCAGACATGTTCATTGTGACATATACAGGAGATCATAACCATCCAAGACCCACCCACCGGAACTCGCTAGCCGGAAGTACACGAACCAAGTCTCCGTCGACACATCCACCCATTTCAATTTCTAGTCAACCAAACAATACAACTTCTTCTTTAGCACCAAACTCTTTTGCTGAAGAAGAGGACGTTGACATGGAAATTGAAACTGATGAGGAAGGTGAAGATAGTTGTGATATTCCTTCCTAA 927 0.4035 MSEDWDLFAIVRSCQSSTNTTTTENSFTTTNTIPSSITTSNFKVELEYDAFSFPNVVQPITNELQVQDLNQSFTSFTPTNTTTTITSGHGINPNSPPHIAKYIGQQQHHFSPTTNSSSIWPHFVQEASTSSFNKFHNQQHNQLQSIQKQEFQIPQSTQPQTPRSRKRKSQQGKMVCHVTADNLSTDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCTARKQVERSNTEADMFIVTYTGDHNHPRPTHRNSLAGSTRTKSPSTHPPISISSQPNNTTSSLAPNSFAEEEDVDMEIETDEEGEDSCDIPS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2108 308 Pfam WRKY DNA -binding domain 186 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g2108 308 MobiDBLite consensus disorder prediction 236 308 - -
Mal1g2108 308 SUPERFAMILY WRKY DNA-binding domain 179 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g2108 308 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 290 - -
Mal1g2108 308 MobiDBLite consensus disorder prediction 286 308 - -
Mal1g2108 308 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 290 IPR044810 GO:0003700
Mal1g2108 308 Gene3D WRKY domain 168 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g2108 308 SMART WRKY_cls 184 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g2108 308 MobiDBLite consensus disorder prediction 149 165 - -
Mal1g2108 308 MobiDBLite consensus disorder prediction 247 283 - -
Mal1g2108 308 ProSiteProfiles WRKY domain profile. 179 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g2108 308 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2108 Mal-Chr1 27590498 27591738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2108 1 258 WRKY Transcription Factor Family AT4G01250 39.850 2.49e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g2108 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2108 K13425 - cam:101509183 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1277 5 22333855 22335686 Mal1g2108 1 27590498 27591738 ECH
Mal3g2774 3 101495093 101496318 Mal1g2108 1 27590498 27591738 ECH
Mal7g4979 7 118728902 118730065 Mal1g2108 1 27590498 27591738 ECH
Mal1g2108 1 27590498 27591738 Mal1g2108 1 27590498 27591738 ECH
Mal8g2922 8 78457365 78458897 Mal1g2108 1 27590498 27591738 PCT