Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2084 ATGTCTTCACCGGGATTCACCGGCGGTGGAGGATCCTCCGATTTCTACGGCGGATCAGCTAGTTTTTCCGGTAGATCCATCACACTACCATCCAACATGAATAACATCAATAACAATAATTTCTCAACCATATCCACCACCCAAAATCTTCACCACCCTTACTACCGAACCCAACAACAACAAATTCCATCAATTTTCATCGACCCTTCTTCTCAAATCGCACAACGCCAAACATCATCCCTCATCGGGAAACGTACCCTTGCTGAATTTCAAACCCAAACCCAAACCCAAAACATCTTCAACAACAACAACAACAACAACCTTAACCTTCACAATTACAATTACAATAATAACCTTAACAACAACAACAGCAGTGTCCTTTCCAACCTTTTAATTCGTTCTGTCAAACCTAGGAATTTCCAACATGGTTCTCCTATGTCCCCACTTTCACCAATGGATTTCACAAATTCACCACCTGAATTCATCAGCCCTTCTTTTTCTTCACCTCGTTTGGGTATGCCTCTTCGCTCAAACCCTATTGTTCAAAACTCATTACCCCTGAGTAATTCATTTCTTCAAAATCCATCATCACTCATGAATAATTCAATCCTCCAAAACTCATTACCCATGAACAATTCAATCCTACAAAACCCATTACCCGTGAATAATTCAATCCTCCAAAACTCATTACCTATGAACAATTCAATACTTCAAAATACAAATTTTTCGTATCAAAATTCCAATTTTGCCCAGATTCAGAACAGGATAATTCCAACAAGCCATGACCCAGAAAAGAAGATGATGGATCATCGCTTACTGGAGGAATTGGAAAAAGATCAGCGCTTACTGGAGCAGGCAAAGAGAGAGCTTCTTGAAGACAATGATGATGAAGGAGAAGACGCAATTTCTGGTATTACCAACCCCAACAGTGAATGGTCAGAAACATTTCAGAATTTGATTAGTTTCGAACAAAACGAGACCCAGAAACTCGTTTCATCATCACCCACTTCTTCAACAACATCGTTGAATTCATCTGCATCCATTCTTTCACCTACATCTTCTGGTTGTTTCAAGCAATCGTTAATGGAAGCTGCCACCGCAATTTCCGAAGGAAACAAGGAATCTGCTTCCGAGATCCTCGCTCGTTTGGCTCAAACACTGAATTCGGATCGTGGATTATTGGATTGCATGGTTTCAGCGCTGAAATCGCGTGTAAACAGCATTGAAAATCCACCTCCAGTAGCGGAACTGTTCAGCAAAGAACACGCTGAGTCAACTCACCTTCTCTTTGATCACTCTCTCTGCTTCAAGGTCTCTTTCATGGCTGCCAATATCGCAATCCTCGAAGCCGCATTTGAAGATACTACAACAGAGAACGAGAACGTGAAGAGCCTCTGTGTTGTTGATTTCGATATTGGTCATGGTAAACAATACTTAACCCTTCTCCATGAATTTCACGCGCGTCTCAATGGTTCTCCAGGAACGTTGAAGATCACAGCGATGGCTGAAAACAACAACGACGACGAAAGGCTGAAGATTGTAGGAGAGAATTTGAGTCGGGAAGCAGAGCTGTTAAGAATCGGTTTTGAATTCAAAGTGGTGAATCTAAAACTCACCGAGTTAACTCGCGAGTCATTGAATTGTGACTCAGACGATATTCTCGCTGTGAATTTCGCGTTCAAGCTATACAGAATGCCAGATGAAAGTGTTTCAACTGAAAATCCACGCGACGCGCTTCTTCGGTGTGTGAAATCACTCTCACCGCACGTGGTAGTAGTTTTGGAGCAAGAAATGAATACAAATACAGCACCGTTTGTTGCACGTGTGGCTGAAACATGTTCGTATTACGGCGCGTTGCTAGAATCTATTGATTCTACAATGGCGCGTGAGAATCCAGAGCGAGTGAAGATTGAAGAGGGACTGAGTCGGAAGATGAGAAACGCGGTTGCTTGTGAAGGGAGAGATCGCGTGGAGAGGTGTGAAGTTTTTGGGAAGTGGCGTGCACGCATGAGTATGGCTGGGTTTAGGTTAAACTCGGTGAGTCAGAAAGTTACTGAGTCAATAAAACCACGACTCGGTCAAGGTAGTAAAGTTACTGTGCATGGAGAGAATGGTGGGGTTTGCTTTGGTTGGATGGGAAGAACTCTCACAGTCGCATCATCTTGGCGTTAA 2172 0.4286 MSSPGFTGGGGSSDFYGGSASFSGRSITLPSNMNNINNNNFSTISTTQNLHHPYYRTQQQQIPSIFIDPSSQIAQRQTSSLIGKRTLAEFQTQTQTQNIFNNNNNNNLNLHNYNYNNNLNNNNSSVLSNLLIRSVKPRNFQHGSPMSPLSPMDFTNSPPEFISPSFSSPRLGMPLRSNPIVQNSLPLSNSFLQNPSSLMNNSILQNSLPMNNSILQNPLPVNNSILQNSLPMNNSILQNTNFSYQNSNFAQIQNRIIPTSHDPEKKMMDHRLLEELEKDQRLLEQAKRELLEDNDDEGEDAISGITNPNSEWSETFQNLISFEQNETQKLVSSSPTSSTTSLNSSASILSPTSSGCFKQSLMEAATAISEGNKESASEILARLAQTLNSDRGLLDCMVSALKSRVNSIENPPPVAELFSKEHAESTHLLFDHSLCFKVSFMAANIAILEAAFEDTTTENENVKSLCVVDFDIGHGKQYLTLLHEFHARLNGSPGTLKITAMAENNNDDERLKIVGENLSREAELLRIGFEFKVVNLKLTELTRESLNCDSDDILAVNFAFKLYRMPDESVSTENPRDALLRCVKSLSPHVVVVLEQEMNTNTAPFVARVAETCSYYGALLESIDSTMARENPERVKIEEGLSRKMRNAVACEGRDRVERCEVFGKWRARMSMAGFRLNSVSQKVTESIKPRLGQGSKVTVHGENGGVCFGWMGRTLTVASSWR* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2084 723 Pfam GRAS domain family 358 723 IPR005202 -
Mal1g2084 723 MobiDBLite consensus disorder prediction 290 310 - -
Mal1g2084 723 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 722 IPR005202 -
Mal1g2084 723 Coils Coil 269 296 - -
Mal1g2084 723 PANTHER SCARECROW-LIKE PROTEIN 8 76 722 IPR030013 -
Mal1g2084 723 MobiDBLite consensus disorder prediction 327 351 - -
Mal1g2084 723 ProSiteProfiles GRAS family profile. 348 723 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2084 Mal-Chr1 27315431 27317602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2084 57 723 GRAS Transcription Factor Family AT5G52510 42.734 6.38e-137 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal1g2084 GRAS 1.8e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2084 - - aip:107644872 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3098 8 84306050 84308014 Mal1g2084 1 27315431 27317602 PCT