Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2070 ATGGGTAGCATCCAAGAAGCGGTATCAATTGCAGAAGAGCGAGTAGTGGAAGGTGTTGAAGAAAACGACACCGTTTACGTTGCGGTGGGAACAAACGCTGAGAAGAACAAAGAACTATTGCATTGGACAACTCACAAATTTTCAGGGAACAATATTTGCCTTCTTCACATTCACCAACCCTTCACAGAAACAAATGTCTCTGAATATGAACCTAAAGACCATGCAATCAAGGCATTCCAGGAGCATGGTAGTCAAACAGTGCATGAACTACTAGACCAGTACATCCTCACTATGGTCCCAGCAGGGGTGCAGGCCTCTAAATTGTTGATTGAGAAGGACGATATTGAGGAAGGGATCATAGAAGCTATTGCTCAACACAATATTAGATGTCTTGTAATGGGAGCAGCTCCAGACAGACATAAGATGGGAGTTGACAGTGAAGACACGCCTGGAATAGTGACTGCCCCTGTATTGTTGATGCTCGACTCAAATACGGAAGCCAAACAATCTGAAATGATTAAATCAGAATTGATTCCTGATGTATTGAAATATTTAGATTCTGGTGACTTGGAAGAGACTGAAAATGGCAATTCCCGCTGTTCTTTAAATGCAGAATGGTCCTATAACAGTGTTATTGCAAGGACAAAGTTGACAAATTTGCTTGTTCATGAGGATGATGAAGAATTACAAAACTGGCGTGCTGAGATAAGTAGAAGAAAAGAAGTTGAAGAACAATTGGCAAGGGAAAAGCAAGACGTACAAGAAATGAAGAACCAGCGAGATGAAATAATATGTGAATTGCAAATGGTCCGAGACCAAAGTTCAGCTCTTAAAAACCAAATGTTTGAGTCCAAGTGTACGGTAACTGAGTTGGAAGAGAAGATTATATCAGCTGTGGACCTTTTGATAAGTTTCAAGGAAAAACGAGATAAGCTAAGGATAGAACATGCAAATGCAGTTAGGAAAGTTGAAATGCTGAGAAAATTTGGAGAAGTGGATACTATGTCCTCTTATGTGGTAGAATTTCCTGCATTTTCTTTCATGGAGATCAATGAGGCAACTCAGGATTTTGATCAATCTTGGAAAATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGACTGCTTCGCAACATGCTTGTTGCCATAAAAATGCTACCCTCTTATGGTTGTCAGAGCCAATCAGAGTTCCAACATCAGGTAGAGGTTTTAAGTAGAGTACGGCATCCAAACCTGTTAACACTAATTGGAAGCTGTGCAGAGTCTAAGTCACTTGTGTATGAATACCTAAACAATGGTAGCCTTGAAAGCCACCTTGCCTGTAAAGATAAGAGTCCACTTCCATGGCAAATTCGAATATCCATTGCTACTGACATATGCTCTGCTCTAATTTTCCTTCACTCCAGTGAGCCTTGTATTATCCATGGGAATTTGAAGCCTAGTAAGGTTCTTCTTGATGCTAACTTTGTTGCCAAACTTGGTGACTTGGGGATTCCTTCTTTAGTCCAGCATAGTGTGGATTCAGCTGACACAGGCACAGTAGTATGTAACACCTCACATAAAAGTTTGGCGTATGTGGATCCAGAGTATCTCAACACTGGTAAACTTACACCAGAGTCAGATGTGTATTCATTTGGTATCATACTGTTACAACTTCTAACTGGAAGACCACTCTCGGGGCTTGTTAGAGATATGAAATGTGCATTGGAAAAAGAAAATCTTAAAAATGTGTTGGACTTGTCAGCTGGTGAATGGCCACTTCATCAAACCACACAACTGGCATATATAGCATTGAGGTGTTGTGAGAAGACTTGGCTTAACCGGCCAGATCTTGTGTCAGAAGTCTGGAGTGTTCTTAAACCATTCAAAACTATTTGCATAGACAGGAGACAAGAGTTGACTTCTAACAAGCTGCAACGAGCTCCTTCTCATTTTGTCTGCCCCATTGTCCAGGAAGTTATGGAAGATCCATACATAGCTGCAGATGGCTTTACATATGAAGAAGAGGCAATAAGGGGATGGTTGGACAGCGGTCATAACACTTCCCCTATGACAAACCTCAAACTTGAACACACAGATTTGGTACCTAATTATGCATTACATAATGCCATTCTGGAGTGGCAGCAACAGTGA 2133 0.4107 MGSIQEAVSIAEERVVEGVEENDTVYVAVGTNAEKNKELLHWTTHKFSGNNICLLHIHQPFTETNVSEYEPKDHAIKAFQEHGSQTVHELLDQYILTMVPAGVQASKLLIEKDDIEEGIIEAIAQHNIRCLVMGAAPDRHKMGVDSEDTPGIVTAPVLLMLDSNTEAKQSEMIKSELIPDVLKYLDSGDLEETENGNSRCSLNAEWSYNSVIARTKLTNLLVHEDDEELQNWRAEISRRKEVEEQLAREKQDVQEMKNQRDEIICELQMVRDQSSALKNQMFESKCTVTELEEKIISAVDLLISFKEKRDKLRIEHANAVRKVEMLRKFGEVDTMSSYVVEFPAFSFMEINEATQDFDQSWKIGEGRYGSVYKGLLRNMLVAIKMLPSYGCQSQSEFQHQVEVLSRVRHPNLLTLIGSCAESKSLVYEYLNNGSLESHLACKDKSPLPWQIRISIATDICSALIFLHSSEPCIIHGNLKPSKVLLDANFVAKLGDLGIPSLVQHSVDSADTGTVVCNTSHKSLAYVDPEYLNTGKLTPESDVYSFGIILLQLLTGRPLSGLVRDMKCALEKENLKNVLDLSAGEWPLHQTTQLAYIALRCCEKTWLNRPDLVSEVWSVLKPFKTICIDRRQELTSNKLQRAPSHFVCPIVQEVMEDPYIAADGFTYEEEAIRGWLDSGHNTSPMTNLKLEHTDLVPNYALHNAILEWQQQ* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2070 710 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 640 710 IPR013083 -
Mal1g2070 710 Gene3D HUPs 12 136 IPR014729 -
Mal1g2070 710 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 226 709 - -
Mal1g2070 710 ProSiteProfiles U-box domain profile. 640 710 IPR003613 GO:0004842|GO:0016567
Mal1g2070 710 Gene3D Transferase(Phosphotransferase) domain 1 430 625 - -
Mal1g2070 710 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 19 143 - -
Mal1g2070 710 Coils Coil 239 273 - -
Mal1g2070 710 SMART Ubox_2 644 707 IPR003613 GO:0004842|GO:0016567
Mal1g2070 710 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
Mal1g2070 710 ProSiteProfiles Protein kinase domain profile. 357 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2070 710 SUPERFAMILY Protein kinase-like (PK-like) 333 611 IPR011009 -
Mal1g2070 710 Pfam Protein tyrosine and serine/threonine kinase 362 611 IPR001245 GO:0004672|GO:0006468
Mal1g2070 710 CDD RING-Ubox_WDSUB1_like 645 686 - -
Mal1g2070 710 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 46 135 - -
Mal1g2070 710 Gene3D Phosphorylase Kinase; domain 1 330 429 - -
Mal1g2070 710 Pfam U-box domain 641 709 IPR003613 GO:0004842|GO:0016567
Mal1g2070 710 PANTHER OS02G0152300 PROTEIN 226 709 - -
Mal1g2070 710 PANTHER OS02G0152300 PROTEIN 19 143 - -
Mal1g2070 710 SUPERFAMILY RING/U-box 638 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2070 Mal-Chr1 27184400 27191388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2070 259 710 U-box Gene Family AT3G49060 52.747 2.10e-160 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal1g2070 PK_Tyr_Ser-Thr 6.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2070 - - mtr:MTR_1g100820 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2070 1 27184400 27191388 Mal1g2070 1 27184400 27191388 ECH