Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2065 ATGTCAGAACCTGAGGAAGAAAATCAAGACTTTCCTCTTAAGACAAAAACATTAGAAGAACATGGGTGTTCTATGGATTTTGATCTGGATTTAGAAACATCATGGCCTTTGGATCACATGTCCTTTCTCTCCAATCCCATGTCACCTTTTCTGTTCTCCACTATCTCTGATCAACCTTCTTCTCCTCTATGGACTTTTACTGATGGAGAAGATGGCAAACTTGCAGCTTCAGCTTTCTCTGATTGCCACAAGATCTTCTCTTGTGATTCAAATTCAATAACTGAGAAGCCGGTGGAGAAAGACGACAACAAAACACTTTTGCCACCCCTTTTGCCACCAATAGAAAATTTGGATGGATATTGTGTAATCAAGGAAAAGATGACACAAGCGCTTCGCTACTTCAAAGAATGGACTGAACTGAATGTTTTGGCTCAGGTTTGGGCACCTGTGAAGAATGGTAATCGGTATGTACTTACAACGTCAGGTCAGCCCTTTGTGCTTGATCCGCATAGTAATGGACTCAATCAGTATAGAACGGTCTCTCTGATGTACATGTTTTCTGTGGATGGAGAGAACGATGGAACTTTAGGACTTCCTGGTCGAGTTTTTCAGCAGAAACTACCAGAATGGTCTCCCAATGTTCTGTACTATTCTAATAAAGAGTATCCTCGCCGAGATCATGCTCAACATTACAACGTTCGTGGAACCTTGGCTTTGCCTGTATTTGAACCTTCGTTGCAGGCATGCATCGGTGTGATAGAGTTGATAATGACCTCACTAAAGATTAACTATGCTCCTGAGGTTGAAAAAATCTGCAAAGCCCTAGAGGCAGTAAATTTGAGAAGTTCAGAGTTTTTGGACCATCCATTCACTCAGATTTGCAATGAAGGGCGTCAAAATGCATTATCGGAGATCTTAGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTAGCCCAAACATGGGTTCCCTGTAGGCATAGGAGTGTTTTGACTCACGGTGGTGGTTTCAAGAAAAGTTGTTCGAGTTTTGATGGTAGTTGCATGGGGCAAGTGTGCATGTCTACAACTGAGGCAGCAGCCTATATCATAGATGCTCATTTATGGGGTTTCAGAGAGGCATGTGTCGAGCATCACTTACAACATGGTCAAGGTGTTGCGGGGAGGGCATTTTTGTCTCAAAACATGAGCTTCTGCACAAACATTACCCAGTTCTGCAAGACTGATTACCCTTTGGTTCATTATGCTCTCATGTTTGGGTTAACAAGCTGTTTTGCAATCTGTTTGCGGAGTTCTCATACAGGAAATGACGATTATGTATTAGAGTTTTTTCTGCCTCCGGGGATCACAGAATTTCATGAACAGAAGACGCTGTTGGGATCCATATTGTCAACAATGAAACAGCATTTTCAGAGTCTTAACATTGCTGCTGGTGTTGAACTCGAGGAAAATGGTTCAATTGAAATTATTGAAGCAACTGACGAAGGCATTCGTCTTAGAACTGAATCTATTCCTATTGTTCAACCTATTAAATCACCACCTAGACCCGATGCATCACCAAATATGGAGGAGGAGGAGGTGCCACAAGACCCATCAGAGATTCATGGTGAAAATGTAGGTGCAAGTGTTGATCCGATGCCCACCGTAGGGAATAAAAACATAAAGAAACCTTCAGAGAGGAAACGTGGAAAAACTGAGAAATCAATTAGTCTTGAAGTTCTACAACGTTATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGCGTTTGCCCTACTACAATGAAGCGCATCTGCAGGCAGCATGGGATATCTCGTTGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTTTCCAAGCTCAAACATGTTATTGAATCTGTCCAAGGCGCTGAAGGAGCGTTTGATTTGAATTCTCTCGGTAATAATCAACTTCCAATTGTTAGTTCTTTTCCAGAGCCTTCTACTCCAAATAAGTCCAGCCAGCAAGGATCATTAAACATTAGGCTTTCAGAGCCTCAGATGAAAGAGAATGAATTTGATGCCTCTAAAGTATCAGAAACAAACAAACAGCTTGTAATGGAAGATCAATTGCTAGGAGGAAGGATACATAGTCTTGAGAAAGAAGTGATTAATGATAAAGGTGTGCATATTCAGGAAACTGGAAAGGACCGAAAAAGGACTAGAACTAGGAGTGGCTCGAGCGAAGATAGCACAAATCCTATTTCTCATGGTTCATGCCACGGTAGTCCCCCAATTGAAATTCCAACCATAAAAGACCTATTGATTCCATCCAACAATGAGCAATATGTTGTGTTGAGGGGATCACCAGAGTCGGGAGTGCGGCCAACCAATGCATTAAACTCTCCAACTGCTCACCGCATGCCCGACAATGTGATAGCAGAACTTCAAGAGCCGTTTGGAGGAATGCTAATAGAGGACGCTGGAAGTTCGAAAGACTTGAGAAATTTGTGTCCTTCAGTAGCCGAGGCCATTTTGGAGGATATGGCTCCAGAAGCTTGTGGGAATAATCTTCCAGGTTCATCTCGGGCTCCTCCTAAACAATGCATGGATACTATTAATAATAATTCAGTGACGCCTTTTGCAGCTAGAAAAGAAATGAAGACTGTGACTATTAAGGCAACATATAGAGAAGATATCATAAGGTTTAGGGTGTCTTTGAACTGTGGCATTGTGGAATTGAAAGAAGAAGTTTCCAAAAGATTGAAACTTGAGGTTGGCATATTTGATATCAAGTACATGGACGATGATAATGAATGGGTTTTGATAGCATGTGATGCAGACCTTCAGGAGTGCATGTATGTTTCAAGAACATCAGGAGGAAGCAACATAATCCGGGTTTTGGTGCATGACATAACGTCGAATCTTGGAAGCTCCTGTGAGAGTTCAGGGGAGTGA 2931 0.4207 MSEPEEENQDFPLKTKTLEEHGCSMDFDLDLETSWPLDHMSFLSNPMSPFLFSTISDQPSSPLWTFTDGEDGKLAASAFSDCHKIFSCDSNSITEKPVEKDDNKTLLPPLLPPIENLDGYCVIKEKMTQALRYFKEWTELNVLAQVWAPVKNGNRYVLTTSGQPFVLDPHSNGLNQYRTVSLMYMFSVDGENDGTLGLPGRVFQQKLPEWSPNVLYYSNKEYPRRDHAQHYNVRGTLALPVFEPSLQACIGVIELIMTSLKINYAPEVEKICKALEAVNLRSSEFLDHPFTQICNEGRQNALSEILEILTVVCETHNLPLAQTWVPCRHRSVLTHGGGFKKSCSSFDGSCMGQVCMSTTEAAAYIIDAHLWGFREACVEHHLQHGQGVAGRAFLSQNMSFCTNITQFCKTDYPLVHYALMFGLTSCFAICLRSSHTGNDDYVLEFFLPPGITEFHEQKTLLGSILSTMKQHFQSLNIAAGVELEENGSIEIIEATDEGIRLRTESIPIVQPIKSPPRPDASPNMEEEEVPQDPSEIHGENVGASVDPMPTVGNKNIKKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKHVIESVQGAEGAFDLNSLGNNQLPIVSSFPEPSTPNKSSQQGSLNIRLSEPQMKENEFDASKVSETNKQLVMEDQLLGGRIHSLEKEVINDKGVHIQETGKDRKRTRTRSGSSEDSTNPISHGSCHGSPPIEIPTIKDLLIPSNNEQYVVLRGSPESGVRPTNALNSPTAHRMPDNVIAELQEPFGGMLIEDAGSSKDLRNLCPSVAEAILEDMAPEACGNNLPGSSRAPPKQCMDTINNNSVTPFAARKEMKTVTIKATYREDIIRFRVSLNCGIVELKEEVSKRLKLEVGIFDIKYMDDDNEWVLIACDADLQECMYVSRTSGGSNIIRVLVHDITSNLGSSCESSGE* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2065 976 ProSiteProfiles RWP-RK domain profile. 557 638 IPR003035 -
Mal1g2065 976 MobiDBLite consensus disorder prediction 510 568 - -
Mal1g2065 976 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 4 975 - -
Mal1g2065 976 Pfam RWP-RK domain 570 618 IPR003035 -
Mal1g2065 976 SUPERFAMILY CAD & PB1 domains 877 966 - -
Mal1g2065 976 MobiDBLite consensus disorder prediction 718 760 - -
Mal1g2065 976 PANTHER PROTEIN NLP8 4 975 IPR045012 GO:0003700
Mal1g2065 976 Gene3D - 877 960 - -
Mal1g2065 976 MobiDBLite consensus disorder prediction 650 669 - -
Mal1g2065 976 SMART PB1_new 880 963 IPR000270 GO:0005515
Mal1g2065 976 MobiDBLite consensus disorder prediction 718 737 - -
Mal1g2065 976 Pfam PB1 domain 880 962 IPR000270 GO:0005515
Mal1g2065 976 CDD PB1_NLP 881 962 IPR034891 -
Mal1g2065 976 ProSiteProfiles PB1 domain profile. 880 963 IPR000270 GO:0005515
Mal1g2065 976 MobiDBLite consensus disorder prediction 520 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2065 Mal-Chr1 27142800 27147197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2065 879 976 NLP Transcription Factor Family AT1G64530 58.586 2.08e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal1g2065 PB1 1.5e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2065 - - gmx:100786118 1538.09