Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2055 ATGTTTGAGTCCAAGTGTACGGTAACTGAGTTGGAAGAGAAGATTATATCAGCTGTGGACCTTTTGATAAGTTTCAAGAAAAAACGAGATAAGCTAAGGATAGATCATGCAAATGCAGTAGAGGTTTTAAGTAGAGTACGGTATCCAAACCTGTTAACACTAATTGGAAGCTGTGCAGAGTCTAAGTCACTTGTGTATGAATACCTAAACAATGGTAGCCTTGAAAGCCATCTTGCCTGTCAAGACAAGAGTCCACTTCCATGGCAAATTCGAATATCCATTGCTACTGACATCTGCTCTGCTCTAATTTTCCTTCACTCCAGTGAGCCTTGTATTATCCATGGGAATTTGAATCCTAGTAAGGTTCTTCTTGATGCTAACTTTGTTGCCAAACTTGGTGACTTGGGGATTCCTTATTTAGTCCAGCATAGTGCGGATTCAGCTGACACAGGCACAGTAGTATGTAACAACTCACATAAAAGTTTGGCGTATGTGGATCCAGAGTATCTCAACACTGGTAAACTTACACCAGAGTAA 537 0.4041 MFESKCTVTELEEKIISAVDLLISFKKKRDKLRIDHANAVEVLSRVRYPNLLTLIGSCAESKSLVYEYLNNGSLESHLACQDKSPLPWQIRISIATDICSALIFLHSSEPCIIHGNLNPSKVLLDANFVAKLGDLGIPYLVQHSADSADTGTVVCNNSHKSLAYVDPEYLNTGKLTPE* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2055 178 Pfam Protein tyrosine and serine/threonine kinase 26 176 IPR001245 GO:0004672|GO:0006468
Mal1g2055 178 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g2055 178 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 10 40 - -
Mal1g2055 178 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 38 178 - -
Mal1g2055 178 Gene3D Transferase(Phosphotransferase) domain 1 4 178 - -
Mal1g2055 178 PANTHER OS02G0152300 PROTEIN 10 40 - -
Mal1g2055 178 PANTHER OS02G0152300 PROTEIN 38 178 - -
Mal1g2055 178 SUPERFAMILY Protein kinase-like (PK-like) 29 177 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2055 Mal-Chr1 26993158 26994111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2055 34 178 U-box Gene Family AT2G45910 48.299 1.38e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal1g2055 PK_Tyr_Ser-Thr 2.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2055 - - mtr:MTR_1g100820 256.529