Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2054 ATGGATAGTTCAAATAATACGGTGGATTGTGTTACTATTGATGATGAAGTTTTAGAAGTTGACAACTTTAAAGATGATTCCGCGCGTTGGGTTCCTTCAACAGAGATGTGTTTTTCTTCCTTAGATGATGTTAAATGTTTTTATGGAGAGTATGCTTTGAGAAAGGGTTTTGGGTGGAAGATTAGAACATCAAGAAAAGGAAACGATGGAGAAATATGTTACTTAATGCTAGCATGCACAAGAGAGGGGTCTACAGTTTCAAAGATTTCGTGTACATTGAAGACACTTCCGACACAGGTGAAAAATTGTCCTGCTAAGATTTGTATGAAGTTGGAAAAGGATGGATTGTGGTACATTAAAAAATTTGACCCAAACCATTCTCATGAGTGTAGCCCTACGAAGTCAAGGTTGTTCAAGGCTAACAAGAAAATGAACATGCATGTAAAGAGGACTATCGAAATCAATGACGATGCAGGAGTGAGGATCAACAAGACTTTCCAATCTCTTGTTAAAGATGCAGGAGGGCATGAAAATATACCATTTTGTGAAAGAGATGTGAGGAATTATGTTAACAAGGAACGACGTGCAATTGGAAAACAAGGTGATGGTAAGGCTTTGCTAAGTTACTTTTGTAAAATGAGGGAACAAAACTCAAATTTCTTCTATGACATAGATTTGGATGACGATTTTCATGTAAGGAACGTGTTTAGGGCTGATGCAAGAAGTAGAGCTGCTTATGAGTATTTTGGAGATGTTGTAACTTTTGACACAACATATTTGACCAATAAATATGACATGCCTTTTGCCGCGTTTGTTGGTGTGAATCACCATGGTCAATCAACATTACTTGGATGTGGGCTGGTTTCTGGAGAAGACACAGAATCATTTGTATGGCTATTCAAATCATGGCTTCGTTGTATGCTAGGAAAGGCCCCTGTGGGTATTGTGACTGACCAATGTAAGGCTATGCAAAATGCTATTAAGTTAGTCTTCCCTACAACACGCCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTGCCGAAAAGCTCAGCAGTTACAGGGAATATAATAAGATGAAGTCTGCAATGAAAGAAGCAGTTTATGATACATACACAGAAACTGATTTTGAAGAGAAATGGTGTTCCTTCATCGACAAATTTGAGCTTCAAAATAATGAATGGTTGTGTGGGTTGTATAATGAACGTTATAGATGGGTGCCACCCTTGTTAAGGAAATATTTTTGGGCAGGTATGTCAACTACACAACGAAGTGAGAGCATACATGCTTTCTTTGATGGATATATCAATTCAACAACAACTCTAAATCAATTTACAAAGCAATATGACAATGCTCTTAGAAGTCGAGCTGAAAAGGAATTCAAATCAGATTTTAATTCAATGAATACTACAATTCCTTGTGGGTCAAGTTCATCCATTGAAAAGCAATTCCAAGGTGAGTACACCCATGCCAAATTCAAAGAAGTTCAAGTTGAATTCAGATCCAAAATGAATTGTGCTGCCTCGTTGAATGTTGTGGAAGGTTTTTTGGCTACTTATCAAGTGTTGGAGAATGTTGTAATTGGAGACTGGTCTAAAGAACGGGTATTAAAAGTTGTGTTTAATCGTGAGAACAATGATTTCAGTTGTGAATGCTCATTGTTTGAGTTTAGAGGCATCTTGTGTCGCCATGTGTTATCTGTGTGTGCTCTAGAAAGGATTAAAAATGTGCAAGAGAAGTATGTTTTAACAAGATGGAAGAAAAATATTAAAAGGAAGCATTCATATATTAAGAGCAGTTATGGCGTGACAGAATTGAAGCCAGAAATGGACAGATTTGACAAATTATGCAAGCATTTCTATGAGATTGCTGAAGTAGCCGCAGGGGATGTAGATTCATCTAAGGCACTCCATGAAACATTAAACCAATTTAAGTCTAATTTGTGTCTTACAGATGGTAAAACCTGCAATGTCGAAGGAAGTTTCAATGATGAACTACAAAGTCCAAACAAAGATTCTGGAATTAAGAGTCCAAAGGGGGTCAAACGTAAAGGTCGTCCTCCATCTAAAAGGAAAATATCTGTAGCTGAAACAGTTGTTAAGAGGTCTAGAAAACGAACCAATCGAAGTGATGACAGAGAGAATACTACAATATGTTTTTTTTTCCTTGAGAAATTTTTTATTTTGTATATAAATTTGTGTATTGAATCTTGTTTTTTTTTTTTGTGA 2229 0.3638 MDSSNNTVDCVTIDDEVLEVDNFKDDSARWVPSTEMCFSSLDDVKCFYGEYALRKGFGWKIRTSRKGNDGEICYLMLACTREGSTVSKISCTLKTLPTQVKNCPAKICMKLEKDGLWYIKKFDPNHSHECSPTKSRLFKANKKMNMHVKRTIEINDDAGVRINKTFQSLVKDAGGHENIPFCERDVRNYVNKERRAIGKQGDGKALLSYFCKMREQNSNFFYDIDLDDDFHVRNVFRADARSRAAYEYFGDVVTFDTTYLTNKYDMPFAAFVGVNHHGQSTLLGCGLVSGEDTESFVWLFKSWLRCMLGKAPVGIVTDQCKAMQNAIKLVFPTTRHRWCLWHIMKKIAEKLSSYREYNKMKSAMKEAVYDTYTETDFEEKWCSFIDKFELQNNEWLCGLYNERYRWVPPLLRKYFWAGMSTTQRSESIHAFFDGYINSTTTLNQFTKQYDNALRSRAEKEFKSDFNSMNTTIPCGSSSSIEKQFQGEYTHAKFKEVQVEFRSKMNCAASLNVVEGFLATYQVLENVVIGDWSKERVLKVVFNRENNDFSCECSLFEFRGILCRHVLSVCALERIKNVQEKYVLTRWKKNIKRKHSYIKSSYGVTELKPEMDRFDKLCKHFYEIAEVAAGDVDSSKALHETLNQFKSNLCLTDGKTCNVEGSFNDELQSPNKDSGIKSPKGVKRKGRPPSKRKISVAETVVKRSRKRTNRSDDRENTTICFFFLEKFFILYINLCIESCFFFL* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2054 742 Pfam SWIM zinc finger 549 569 IPR007527 GO:0008270
Mal1g2054 742 PANTHER OS03G0843700 PROTEIN 23 615 - -
Mal1g2054 742 MobiDBLite consensus disorder prediction 661 694 - -
Mal1g2054 742 Pfam FAR1 DNA-binding domain 47 131 IPR004330 -
Mal1g2054 742 ProSiteProfiles Zinc finger SWIM-type profile. 537 573 IPR007527 GO:0008270
Mal1g2054 742 Pfam MULE transposase domain 252 346 IPR018289 -
Mal1g2054 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 615 IPR031052 GO:0006355
Mal1g2054 742 SMART 26again6 548 575 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2054 Mal-Chr1 26982089 26984317 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g2054 MULE 2.6e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2054 - - gmx:102667848 782.326