Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2044 ATGGTGAGCCAAAGACAACGACTCGCTAAGAAACGCTACAAAGAAGAACACCCTGAACTCTTCCCCAAAGCCGAACCCACACCACCAAAAGACCCATCAAAGAAAAAGAAAAACAAATTCAAGCGCAAAAAAACCGATTCAAATTCCAAACCCCGTACCGGAAAACGCCCCCTTCGAGTTCCGGGTATGAAACCCGGTGACAGCTGTTTCATTTGCAAGGGATTAGACCACATCGCCAAATTCTGTACCCAAAAAGCTGAATGGGAAAAGAATAAGATATGTTTGCGGTGTCGCCGACGTGGTCATCGAGCTCAGAATTGTCCTGATGGTGGTTCTAAAGAGGATTTTAAATATTGTTATAATTGTGGTGATACTGGTCACTCTCTTGCTAATTGTCCTAATCCTCTTCAAGAAGGTGGGACTATGTTTGCTGAGTGTTTTGTTTGTAAGGAACAAGGGCATTTGAGTAAAAATTGCCCTAAAAATGCTCATGGCATTTATCCTAAGGGTGGTTGTTGTAAAATATGTGGTGGTGTCACACATTTGGCAAGGGATTGTCCTGATAAAGGGCAGAATGGATTTGGCGGTGGTGCTAAAGGGCCTGTTCATAACTGTGGAGGAAGGCTTGCTAGGTGCTTATTTTGTAATGCACACGGGCACTTCAGCTATAACTGCCCTGGAAATGGTCATGAACCAAAGGGGTGGCCGGTGGAAGCTGAAACGAAAATCCAGTGTTGA 738 0.4444 MVSQRQRLAKKRYKEEHPELFPKAEPTPPKDPSKKKKNKFKRKKTDSNSKPRTGKRPLRVPGMKPGDSCFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCGDTGHSLANCPNPLQEGGTMFAECFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDCPDKGQNGFGGGAKGPVHNCGGRLARCLFCNAHGHFSYNCPGNGHEPKGWPVEAETKIQC* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2044 245 MobiDBLite consensus disorder prediction 34 49 - -
Mal1g2044 245 MobiDBLite consensus disorder prediction 1 62 - -
Mal1g2044 245 SUPERFAMILY Retrovirus zinc finger-like domains 113 163 IPR036875 GO:0003676|GO:0008270
Mal1g2044 245 ProSiteProfiles Zinc finger CCHC-type profile. 119 134 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 ProSiteProfiles Zinc finger CCHC-type profile. 94 109 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 ProSiteProfiles Zinc finger CCHC-type profile. 146 161 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 Gene3D - 63 116 - -
Mal1g2044 245 PANTHER OS04G0555800 PROTEIN 1 192 - -
Mal1g2044 245 PANTHER OS04G0555800 PROTEIN 200 235 - -
Mal1g2044 245 Pfam Zinc knuckle 146 161 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 Pfam Zinc knuckle 118 134 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 Gene3D - 168 234 - -
Mal1g2044 245 Gene3D - 117 167 - -
Mal1g2044 245 SUPERFAMILY Retrovirus zinc finger-like domains 62 110 IPR036875 GO:0003676|GO:0008270
Mal1g2044 245 SMART c2hcfinal6 172 188 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 SMART c2hcfinal6 145 161 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 SMART c2hcfinal6 68 84 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 SMART c2hcfinal6 93 109 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 SMART c2hcfinal6 211 227 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 SMART c2hcfinal6 118 134 IPR001878 GO:0003676|GO:0008270
Mal1g2044 245 MobiDBLite consensus disorder prediction 8 33 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2044 94 189 C2H2 Transcription Factor Family AT5G20220 30.702 3.58e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2044 - - ahf:112779196 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2044 1 26783862 26795887 Mal1g2044 1 26783862 26795887 ECH