Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2000 ATGGGCTTTCTCCGGCGACTCTTTGGCGCCAAAAAACAGAACCTTCCCTCTGACGGTTCCAAATCCGACAAAGACAACAACAAAAGAAGATGGAGCTTCGGCAAACAAACCAGTAAAAGAAAGTCACTCCCACCGCCGCCGGCGCCACCACCCTCCGCCTTGAACCACTTTGACACTTCCACTTCCTTAGAACGCAACAAACATGCAATTGCCGTCGCCGCCGCTACCGCAGCAGTTGCTGAGGCTGCTCTCGCTGCCGCACATGCTGCGGCGGAGGTGGTTAGACTCACAAGCAACGGCGTGGCGGGAAGTAGTAACAAAGCGCGTGGTGGTCAGTTACGGTTGCCGGAGGAGACTGCCGCCGTTAAAATACAGTCAGCTTTCCGTGGTTACTTGGCAAGGAGAGCGTTGAGAGCACTTAAAGCATTGGTGAAGTTACAAGCACTGGTTCGAGGCCACATTGTGAGAAAACAAACTGCAGATATGCTAAAACGCATGCAAACATTGGTGCGACTTCAGACACAGGCACGTGCAAGTCGTTCACACCACTTGTCATCAGACAATTTTCATTCTTTCAAGTCTCCACTCTCTCATTACCCTGTCCCTGAAGAATATGAGCATACACATCGTGTCAATAGTACAAAATTAGGTGGATCTTCCATCCTAAAGAGATGCAGCTCCAATGCAAATTTTAGGAAGATTGAGTCAGAGAGATCGCGGTTTGGCTCCAATTGGTTAGACCATTGGATGCAAGATAACTCATGTAGCCAAACCAAAAATTCTTCATTCAAGAATAAACATTCTCATGATGATCATAAAAGTGATAAGATTCTCGAAGTAGATACTTGGAAGCCACATTTAAATAAAAATGAGAATAATGTGAATTCTATATTATTACATGAGTCTCCATCAAAACATTCAACAAAAGCTCAAAATCAAAGTCTCTCGTTGAAGTTTCACAAAGCAAAAGAAGAAGTAGCAGCATCACGCACTGCTGATAATAGTCCACAAACATTTTCTGCTTCTTCAAGAAATGGAAATGGTGTAAGAAGAGGTACTCCTTTTACACCAACAAGAAGTGAGTGTTCATGGAGTTTCTTAGGTGGTTACTCTGGTTACCCTAATTACATGGCAAACACTGAATCTTCACGAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGCATGAGTTTGAGGATTACAGTTCTACTAGAAATCCTTTTCAGGGTCTTTGGGAAGTGGGGTCTACTAATTCAGACAATGATTCTGATGCAAGGAGCAACAAAATCTCACCTGCTTTGAGTCGTTTTAATAGAATTGGAAGTAGCAATTTAAGGTGA 1344 0.4382 MGFLRRLFGAKKQNLPSDGSKSDKDNNKRRWSFGKQTSKRKSLPPPPAPPPSALNHFDTSTSLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSNGVAGSSNKARGGQLRLPEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLKRMQTLVRLQTQARASRSHHLSSDNFHSFKSPLSHYPVPEEYEHTHRVNSTKLGGSSILKRCSSNANFRKIESERSRFGSNWLDHWMQDNSCSQTKNSSFKNKHSHDDHKSDKILEVDTWKPHLNKNENNVNSILLHESPSKHSTKAQNQSLSLKFHKAKEEVAASRTADNSPQTFSASSRNGNGVRRGTPFTPTRSECSWSFLGGYSGYPNYMANTESSRAKVRSQSAPRQRHEFEDYSSTRNPFQGLWEVGSTNSDNDSDARSNKISPALSRFNRIGSSNLR* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2000 447 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Mal1g2000 447 PANTHER IQ-DOMAIN 5-RELATED 1 445 - -
Mal1g2000 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 162 IPR027417 -
Mal1g2000 447 MobiDBLite consensus disorder prediction 17 32 - -
Mal1g2000 447 SMART iq_5 139 160 IPR000048 GO:0005515
Mal1g2000 447 SMART iq_5 116 138 IPR000048 GO:0005515
Mal1g2000 447 MobiDBLite consensus disorder prediction 330 356 - -
Mal1g2000 447 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Mal1g2000 447 MobiDBLite consensus disorder prediction 326 356 - -
Mal1g2000 447 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Mal1g2000 447 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Mal1g2000 447 MobiDBLite consensus disorder prediction 1 58 - -
Mal1g2000 447 Gene3D - 116 181 - -
Mal1g2000 447 MobiDBLite consensus disorder prediction 384 403 - -
Mal1g2000 447 Pfam Protein of unknown function (DUF4005) 335 422 IPR025064 -
Mal1g2000 447 PANTHER CALMODULIN-BINDING PROTEIN 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2000 Mal-Chr1 26253564 26259032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2000 1 404 IQD Protein Family AT5G62070 47.294 1.61e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g2000 - - gmx:100783694 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2000 1 26253564 26259032 Mal1g2000 1 26253564 26259032 ECH