Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1999 ATGGGTTTCAATGTTAGAAAAGATTGGATAAATAGGAGTAAGGTACATGGTATGGTGGTTTCTAGAAAATTTACTTGCTCTAGAGAGGGATACCGTAGGAAAGACAAGAGAGATTTTACTGTGAAGAAACATCGCAAAGAGACGAGAACTGGCTGTTTGGCACACATGATCATCACTCGTCAACAAGATGGAAAATACCAGGTCACCCATTTTGAAGCACAACATAATCATGATGATGTAAACCCAATCAATTCTAACATGTTGTTACTAGAGTTGCAAAGTGAATTTTGTGTTGCTCAAGCCGTTGAGGTTGACTCATATAATAATCTGGGACCCAAATCTACGTCAGCGTTAAATATGATGAATCAAAAATTAGGTGCACACGATTCGCTTGATCATCTTTCCGTGAATTATGACAATTATCTTCATTCTGTAAGGGAAAGAGATATGGGTAAAGGAGAAGCAGGGCGTTTGCTGGGTTATTTTCAAAGGCAACACTTTGAAAATCCAACATTTTTTTATTCCATACAGCTTGATGTTGATGATAAGTTAACCAATCTATTTTGGGCTGATGACAATATGGTGGTAGATTACGACCATTTTGGGGATGTTGTTTGTTTGGATACAACTTGCAGAACAAACAGAGCTCTTCGGCCATTTGTACAATTTTTAGGTGTTAATCATCACAAACAAGTATTGATATTTGCTGCTGCTTTTCTGTATGATGAGACCATAGAATCATTTAATTGGTTATTTCGAACTTTCATTGGCGCAATGTCTGGGAAAAAGCCAAAGGCCATTTTCACAGAACAAGATGCAGCAATCATTGAAGCAGTCAATACGGTTTTACCTGAAACAAACCGGTATACATGTGTATGGCAGATGTATGAGAACACTCTGAAACACCTCAGCCATTTTGTTAAAGATGATGAATCCTTTGCAAATGATCTAAGGAGTTGTATATATGACCCCAAGGATGAGGAAGAATTTTCTCATGCTTGGGAGGCTATGCTGGAGAAATATAATCTACAGCAAAATGAATGGTTGAGATGGATGTATAGAGAAAGGGAGAAATGGGCTGTTTGCTTTGATCAAAATACATTTTTTGTAGATGTCAAAGGCTTTCATTTAGGTGAGATATTGTCTCATAAGTTCAGAAGTTATCTTAATCCAGACCTTGATGTAGTTCAATTTTTTAACCATTTTGAAAGGGTAGTAGATGAGCAACGCTATAAAGAAGTAGAAGCTAGTAATGAAATGCAGGGATGTTTTCCCAAGCTAATGGGTAATGTGGTTATATTGAAACATGCAAGTGTTGCTTATACTCCAAGAGCATTTGATGTATTTCAGCAAAGATATGAGAAGTCTTTGAATATTCTTGTCAACCAGCACAACATAGATGGATCTTTGTTTCAGTATAAAGTGAATACATTTGGCCATGCTAGACAATACAGTGTCACCTTCAATTCTTCAGATAATTCAGTGTTCTGCAGTTGTATGAAGTTTGAACATGTTGGTTTTCTGTGTAGCCACGCACTAAAAGTTCTTGATAATAGAAACATAAAAGTAGTTCCGTCTCAATATATCTTGAAGAGATGGACAAAAGATGCAAGGTTGGGAAATATCAGGGAGATTAAACAATGCGAAATTCTAGATAACCCTAAGATGGTTGTAGCAAGCTGTTACAAAGATTTGTCCCACAGACTTGTCAAGTTATCAGCAAGAGCTTCTGAATCTGTGGAGGCTTATCAATTTGCCGTGAGGCAACTTGATGAAGTGATGGAAGGAGTGCAGAAAATCTTGATATTGAAAGGTGAGGAAGCTCAAGTTATCACCTCAAATAGTATTCATGTAGATGCTTCAGAAAGTGAGCCTGCAGAGATCTTTCCGAATGGACATGCAACTGAGGATCAGGATGTAAGTAACAGAGTAAGCGGAGAAATTGACGGGAGCATTACACTGGATAGGTGCCAAACGGTGATGAATTATAATCAAACTGATTCAGATAGGATTTTCAATGTAGAACCTCCTCCAAATACTGTAGTCTGCATTTCAAACCCCGTATCTCCATATGTTTCATCTCAATCCGTGACACCAAATCCCCTTTTGCAGGGCTTATTCGGTTTTGAAGCCAATCAAGTGGTTCAATGTATCTATGAACAGCCTGATCTTGTGTTGGACCATCAATCTAATTCTAACCTGTTCCAACCGCCAAACTTCTATTCTAACCAACCGAGTTCTCCTTGCCGTTCTCAACCATCACAGGAACCTATAATCCAAAACACATACCATGAGTCCATGCCAAGCAATAATCAGATGCAACAGGGGATGGATCTTGATATTCAAAATCCTCATTCAGAATCCTGTATCTTGCTGTCTGACCATAGCTACAGAAGTTCTGACTCGGCATAA 2412 0.3823 MGFNVRKDWINRSKVHGMVVSRKFTCSREGYRRKDKRDFTVKKHRKETRTGCLAHMIITRQQDGKYQVTHFEAQHNHDDVNPINSNMLLLELQSEFCVAQAVEVDSYNNLGPKSTSALNMMNQKLGAHDSLDHLSVNYDNYLHSVRERDMGKGEAGRLLGYFQRQHFENPTFFYSIQLDVDDKLTNLFWADDNMVVDYDHFGDVVCLDTTCRTNRALRPFVQFLGVNHHKQVLIFAAAFLYDETIESFNWLFRTFIGAMSGKKPKAIFTEQDAAIIEAVNTVLPETNRYTCVWQMYENTLKHLSHFVKDDESFANDLRSCIYDPKDEEEFSHAWEAMLEKYNLQQNEWLRWMYREREKWAVCFDQNTFFVDVKGFHLGEILSHKFRSYLNPDLDVVQFFNHFERVVDEQRYKEVEASNEMQGCFPKLMGNVVILKHASVAYTPRAFDVFQQRYEKSLNILVNQHNIDGSLFQYKVNTFGHARQYSVTFNSSDNSVFCSCMKFEHVGFLCSHALKVLDNRNIKVVPSQYILKRWTKDARLGNIREIKQCEILDNPKMVVASCYKDLSHRLVKLSARASESVEAYQFAVRQLDEVMEGVQKILILKGEEAQVITSNSIHVDASESEPAEIFPNGHATEDQDVSNRVSGEIDGSITLDRCQTVMNYNQTDSDRIFNVEPPPNTVVCISNPVSPYVSSQSVTPNPLLQGLFGFEANQVVQCIYEQPDLVLDHQSNSNLFQPPNFYSNQPSSPCRSQPSQEPIIQNTYHESMPSNNQMQQGMDLDIQNPHSESCILLSDHSYRSSDSA* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1999 803 Pfam MULE transposase domain 204 298 IPR018289 -
Mal1g1999 803 Pfam SWIM zinc finger 491 518 IPR007527 GO:0008270
Mal1g1999 803 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 2 672 - -
Mal1g1999 803 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Mal1g1999 803 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 672 IPR031052 GO:0006355
Mal1g1999 803 SMART 26again6 495 522 IPR006564 GO:0008270
Mal1g1999 803 ProSiteProfiles Zinc finger SWIM-type profile. 484 520 IPR007527 GO:0008270
Mal1g1999 803 MobiDBLite consensus disorder prediction 736 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1999 Mal-Chr1 26248472 26251274 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1999 MULE 3.3e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1999 - K17604 gmx:100809803 1224.54