Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1989 ATGACAACCAGTGCTACCATACCTAGTGTTGGCATGGAATTTAATAGTGTAGATGAAGCTTGGCGATTTTGGGTTGAGTATGGTAAACAAACTGGCTTTGGAGTTAGAAAGGATTATATCAACAAAAGAAAGAAAGACAAATCCATTAGATCATGCAGATTTGTTTGTTGCAAGGAGGGTCATCGAGTGCCGGACAAGAGATCTTATTTAGTTAAGAATCCTAGAGCTGAAACAAGAACTGATTGCAAAGCAAGAATTGCACTTACTGTAAAGAATGGAAAGTTTGTAATCCATGAGTTTGTGGAGGACCATAACCATGATTTACAGCTTCCACAAACAACACACATGCTAGCATCACACCGTAAAATATCTGAAGTTCAAGCATATGAAATTGAAATGGCAGAGGACTCCGGGTTGAGGCAAAAGTCTTCATTTGGACTTATGAGTGCACAAGCAGGTGGCAGAACTAATCTTGGATATACACGGTTGGATGCTAAGAACTATCTTAAAGCAAGAAGACAACGTAATATGGTTTATGGGGAAGTTGGTAGTCTTATGAAGTATTTTCAACATCAGTTATTAAAGAATCCTTCTTTTTTTCATGCACATCAGATGGATTGCGATGAACAAATTACAAATGTATTTTGGGCTGATGCAAAAATGATTTTAGATTATGGATATTTTGGTGAGGTGGTTTCTTTGGATACAACATATTGCACTAATCACGCTAATAGACCGTTAGCATTGTTTTCAGGCTTTAACCATTATAGAGGAACTGTCATTTTTGGGGCTGCACTCTTATATGATGAAACTGCTGAATCTTTCAAATGGTTATTTGAAGTATTACTTGAAGCACATGGAAATAAAAAACCTCAAACTTTGTTCACAGATCAAGACCAAGCAATGGCTAAAGCTCTAGCTGAAGTGATGCCAGAGACTCGACACGGGTTATGTACATGGCACTTGATGCAGAATGGTATAAAACACCTTGGTAACTTGATGAAAAAAGGAAGTCATTTCTTGGCTGATTTTAAGAAGTGCATGTATGATTATGACCAAGAGGAGAAGTTTGAGGCAGCTTGGAGCAAGTTGGTTTCAGAATTTAATATCAACGAAAACAATTGGGTGAAGTCGATGTATGCTATTAAGGAAAAATGGGCAGCATGTCACATGAAGTCAGCGTTCACGTTGGGAATGCGAAGCACTCAACTTAGTGAGAGTTTGAATTCTGATTTTAAGGCATGTATGACACCAAACATCAATGTTACTGATTTTTTCCAACACTTTGAGAGAGTTGTTGAGGAAAAGCGATATAATGAGTTAGTTTGTGAATATGAGTCTCGGCATAAACTACCACATTTAAGATACAGCTATTCACCAATTTTAGTGCAACTTGCACAAATATACACACCTGCCATTTTTGACACATTCCATAATGAATTTTCCTTATTTTTAGCTGCCTGCATTCGGGAAAGAAATATGTCCCAACTTCCATTTGAATATATCATCACCTTGGTCAATGAGGAAGGAGAGTGGAGAGTTCTATTTGATCCTGTACAATCATCTATATCATGTAGTTGTAGGAAGTTTGAGACTTTTGGAATACTTTGTTGCCATGCATTAAAGGTCTTTGAGGCAAATGATGTTAAGCTTGTCCCTCAACAATACATCTTAAAGAGGTGGACAAGAGATGCACGTAGTGGTATTATACATGATACAAGGAGAAATGAGGTTGTGGAAGATCCCAAATTATCTATAACACAACGATATAGGCAACTTTGCTCCACAATGATTAGATTGGCAGCCGATGTATCTACATGTCCTACATTATATGAACTTGCAGAAACTGTTATACATGACTTGTGTAAAAAAGTGATTGAGGTTCGACTACAGCAAAATGCAATGGCCAATGATGAAGGCGGTGTTCCAACATTGGCTGAACCAATTGAGACAACAGCAAAGGGGTATAAGAACCGGCCTGGGTTAAAGAGACAAAGACGATTAAAGAGTTGGATTGAACGTCAGCCTAAAACCATAAGCAAAGCTCAGACTGTACAATCTTCGTCATGTCATCAATCAAGGGATATTGGATCTTCAAATCAGATGGTCTTTCAAACATCAAGTATGGCACATCCATCACATGAGTTATCTCAAACAAATCAGTTTAGTATTGGATCTTCAAATCCGATGGTCTTTCAAACATCAAGTGTGGCACATCTATCGCATGAGTTATCTCAAACAAATCAGTTTAGTATTGGATCTTCAAGTCCGATGGTCTTTCAAACATCAAGTGTGGCACATCCATCACATGAGTTATCTCAAACAAATCAGTTTAGTTTCACTAGATTATTAATGGAGTCACTTAGACATGAATGA 2376 0.3763 MTTSATIPSVGMEFNSVDEAWRFWVEYGKQTGFGVRKDYINKRKKDKSIRSCRFVCCKEGHRVPDKRSYLVKNPRAETRTDCKARIALTVKNGKFVIHEFVEDHNHDLQLPQTTHMLASHRKISEVQAYEIEMAEDSGLRQKSSFGLMSAQAGGRTNLGYTRLDAKNYLKARRQRNMVYGEVGSLMKYFQHQLLKNPSFFHAHQMDCDEQITNVFWADAKMILDYGYFGEVVSLDTTYCTNHANRPLALFSGFNHYRGTVIFGAALLYDETAESFKWLFEVLLEAHGNKKPQTLFTDQDQAMAKALAEVMPETRHGLCTWHLMQNGIKHLGNLMKKGSHFLADFKKCMYDYDQEEKFEAAWSKLVSEFNINENNWVKSMYAIKEKWAACHMKSAFTLGMRSTQLSESLNSDFKACMTPNINVTDFFQHFERVVEEKRYNELVCEYESRHKLPHLRYSYSPILVQLAQIYTPAIFDTFHNEFSLFLAACIRERNMSQLPFEYIITLVNEEGEWRVLFDPVQSSISCSCRKFETFGILCCHALKVFEANDVKLVPQQYILKRWTRDARSGIIHDTRRNEVVEDPKLSITQRYRQLCSTMIRLAADVSTCPTLYELAETVIHDLCKKVIEVRLQQNAMANDEGGVPTLAEPIETTAKGYKNRPGLKRQRRLKSWIERQPKTISKAQTVQSSSCHQSRDIGSSNQMVFQTSSMAHPSHELSQTNQFSIGSSNPMVFQTSSVAHLSHELSQTNQFSIGSSSPMVFQTSSVAHPSHELSQTNQFSFTRLLMESLRHE* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1989 791 Pfam MULE transposase domain 231 325 IPR018289 -
Mal1g1989 791 PANTHER OS03G0181600 PROTEIN 4 629 - -
Mal1g1989 791 Pfam FAR1 DNA-binding domain 22 109 IPR004330 -
Mal1g1989 791 SMART 26again6 523 550 IPR006564 GO:0008270
Mal1g1989 791 Pfam SWIM zinc finger 519 546 IPR007527 GO:0008270
Mal1g1989 791 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 629 IPR031052 GO:0006355
Mal1g1989 791 ProSiteProfiles Zinc finger SWIM-type profile. 501 548 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1989 Mal-Chr1 26126194 26128740 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1989 MULE 2.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1989 - - cam:101507984 864.374