Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1979 ATGGAAGTGAACCCTAACGGCGGCGATGGTTTCAGTGAAGAAAACAATACCAACAGTACTGATGTATCTCCGTCGGAGACGACGGACCCAGCGGCGGCGGTAATGAAAGAAGAGCTAACGGAAACGGAAAACAACAGCCTTATTCCGATGCCGGTTCCGACGATGACAGTGGCGGCGTCGAAGAGGTCATCAAAGGACCGTCACACGAAAGTGGAGGGACGTGGTCGGAGAATCAGGATTCCGGCGACATGCGCCGCCAGGATCTTTCAACTGACACGAGAGCTAGGTCACAAATCCGACGGAGAAACAATACGGTGGTTACTTGAACAAGCTGAACCTTCTATCATTGAAGCTACAGGCACCGGAACGGTGCCAGCCATTGCTGTTTCCGTCGGAGGGACGTTGAAGATTCCAACGTCATCGCCGGCGAGACCGGATGGTGAAGATGTTCCAGTGAAGAGAAGAAGAAGAGCTTCAAATAGTGAGTTTGTTGATTTGAATGATCAAGTTTCACTATGTTCAGGGCTAGCACCGATTGCTCAAACATCATACGGTGGTTGCAGCGGTGGTGGTGGTGAAAATGGTGGTGGTCTTGTTCCGTTATGGCCTGTGGCGAGTAATGGTGTTGGGTCTAATACAACAGGGTCATTTTTCATGTTCCCAAATTCAACTATTATGAATCAGCCACAGTTTTGGGCTATTCCTGCAGCACCATTTTTCAATGTGCAAACAAGACCTATTTCTGATTTTGTTTCTGCTATGCAAATGCAACCACCTTCACCTTCAAATGCTGCTGCTACTGCTTATGCAAATTCCAATGCTTCATCTACTTTGGCTCCTAGTTTGAGTTCAGCAACTTCAACTAGTTGTTCTGCTACTTCTTCATCCTCTGCCACTAACACTCAGATGCTAAGGGATTTTTCTTTGGAGATTTTTGACAAGAAAGAATTGCAGTTTATGGGTTGTTCTTCTGCTAATTTGGAATCACCTCCCTCTTCAAATCCTTCAAATTGA 1014 0.4655 MEVNPNGGDGFSEENNTNSTDVSPSETTDPAAAVMKEELTETENNSLIPMPVPTMTVAASKRSSKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSIIEATGTGTVPAIAVSVGGTLKIPTSSPARPDGEDVPVKRRRRASNSEFVDLNDQVSLCSGLAPIAQTSYGGCSGGGGENGGGLVPLWPVASNGVGSNTTGSFFMFPNSTIMNQPQFWAIPAAPFFNVQTRPISDFVSAMQMQPPSPSNAAATAYANSNASSTLAPSLSSATSTSCSATSSSSATNTQMLRDFSLEIFDKKELQFMGCSSANLESPPSSNPSN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1979 337 MobiDBLite consensus disorder prediction 9 27 - -
Mal1g1979 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 333 IPR005333 GO:0003700
Mal1g1979 337 MobiDBLite consensus disorder prediction 1 33 - -
Mal1g1979 337 Pfam TCP family transcription factor 63 130 IPR017887 -
Mal1g1979 337 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Mal1g1979 337 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 17 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1979 Mal-Chr1 25995975 25996988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1979 1 320 TCP Transcription Factor Family AT5G51910 47.590 6.44e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal1g1979 TCP 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1979 - - cam:101514016 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1979 1 25995975 25996988 Mal1g1979 1 25995975 25996988 ECH