Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1978 ATGGCTCCTCTGCCAGCACAAAACCTTTATCCAATTCTTTTCCTCCTCTTTACAATATTTGCATTATCCAAAGCTGAACTTCATGCCCATTACTATGACCAAACATGTCCACAATTGGACAAAATCATTTCAGAGACGGTTCTCAACGCTTCTATCCATGACCCAAAAGTCCCAGCCCGCATTTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTATTGCTGGACTCAACTGCCACTAACCAAGCTGAGAAAGACGGGCCTCCTAATATCTCAGTTCGATCATTCTATGTGATTGATGAAGCTAAAGCAAAGCTTGAATTGGCTTGCCCAGGCATTGTTTCTTGTGCTGATATACTTGCTCTTTTAGCAAGAGACGTGGTTGCCATGTCTGGAGGTCCATATTGGAAAGTACTAAAAGGAAGGAAAGATGGAAGGGTATCAAAGGCATCTGATACCGCCAACTTACCAGCCCCAACCTTGAATGTAGACCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTGACTTTATCCGGAGGACACACTCTGGGTTTCTCACATTGTTCTTCCTTTGAGGCTCGTCTTCATAATTTCAGTTCCGTGCATGATATTGACCCAAGGTTGAACACTGAATTTGCACTAGACCTAAAAAATAAGTGCCCGAAACCAAACAACAACCATAATGCAGGACAATTCCTGGACTCAACAGCATCAGTGTTTGATAATGACTATTACAAACAACTGCTGGCTGGAAAAGGTGTGTTTTCTTCTGATCAGTCACTTATTGGTGATTACAGAACTAGATGGATTGTTGAAGCATTTGCAAGAAACCAGAGTTTGTTTTTCGAAGAGTTTGCAGCTTCAATGTTGAAACTTGGAAATCTAAGAGGCTCCGATAATGGAGAAGTGAGACGTAATTGCAGGATTGTGAATTGA 969 0.419 MAPLPAQNLYPILFLLFTIFALSKAELHAHYYDQTCPQLDKIISETVLNASIHDPKVPARILRMFFHDCFIRGCDASVLLDSTATNQAEKDGPPNISVRSFYVIDEAKAKLELACPGIVSCADILALLARDVVAMSGGPYWKVLKGRKDGRVSKASDTANLPAPTLNVDQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFEARLHNFSSVHDIDPRLNTEFALDLKNKCPKPNNNHNAGQFLDSTASVFDNDYYKQLLAGKGVFSSDQSLIGDYRTRWIVEAFARNQSLFFEEFAASMLKLGNLRGSDNGEVRRNCRIVN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1978 322 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PANTHER PEROXIDASE 66 8 321 - -
Mal1g1978 322 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 Gene3D Peroxidase, domain 2 162 303 - -
Mal1g1978 322 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 Gene3D - 30 322 - -
Mal1g1978 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mal1g1978 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Mal1g1978 322 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Mal1g1978 322 PANTHER PEROXIDASE 25-RELATED 8 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1978 Mal-Chr1 25991173 25992631 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1978 9 322 Peroxidase AT5G51890 68.889 2.24e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1978 K00430 - gmx:100799516 562.762