Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1972 ATGCCCCTTTTGCACAAGCTTCCCTTTCCTTTCCTTTTCATCCCTTCCATAAGCCTGCCTGAGAGCCTCCGAAACCAACTCCAATGGTATGCATGCTCCTTTGATGCCGGAAACCGCGATGACGCATTGGCATATCTTAAAGCAGTAAAAGCTGCGTTTGAATATAAGAGGAGAAAGTATGATCAGTTGTTAAAACTCCTAATAGATTTCAGGGATGGAAAAATTGATATAAGAGGTGTCAAAGCAAGAGTGAAGGGGTTGTTTAAAGTTGCAACAGCATTTCTTAAAGCAGTAGAAGCTGCGTTTCAACATAATAACAGGAAAAAGTATGATCAGTTTTTCAAAGTTATGAGAATTGATACAAGAGGTGCCGTGACAAGAGTGAAGGAGCTGCTTAAAGGGCATTCAGATTTAATTTTGAGATTTCTTCCTCCCAAAGGAACATCAAATCACACTTCCATTTCAACTTGA 471 0.3992 MPLLHKLPFPFLFIPSISLPESLRNQLQWYACSFDAGNRDDALAYLKAVKAAFEYKRRKYDQLLKLLIDFRDGKIDIRGVKARVKGLFKVATAFLKAVEAAFQHNNRKKYDQFFKVMRIDTRGAVTRVKELLKGHSDLILRFLPPKGTSNHTSIST* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1972 156 PANTHER PROTEIN, PUTATIVE-RELATED 39 89 - -
Mal1g1972 156 PANTHER PROTEIN, PUTATIVE-RELATED 89 142 - -
Mal1g1972 156 SUPERFAMILY PAH2 domain 39 89 IPR036600 GO:0006355
Mal1g1972 156 Gene3D Paired amphipathic helix 41 91 IPR036600 GO:0006355
Mal1g1972 156 Gene3D Paired amphipathic helix 92 144 IPR036600 GO:0006355
Mal1g1972 156 ProSiteProfiles PAH domain profile. 80 149 IPR003822 GO:0006355
Mal1g1972 156 PANTHER SIN3B-RELATED 39 89 IPR039774 GO:0003714
Mal1g1972 156 PANTHER SIN3B-RELATED 89 142 IPR039774 GO:0003714
Mal1g1972 156 SUPERFAMILY PAH2 domain 91 142 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1972 Mal-Chr1 25952171 25952803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1972 41 89 WRKY Transcription Factor Family AT4G12020 53.061 4.44e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1972 K11644 - mtr:MTR_3g006065 71.6329