Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1969 ATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTATTGCTGGACTCAACTGCCACTAACCAAGCTGAGAAAGACGGGCCTCCTAATATCTCAGTTCGATCATTCTATGTGATTGATGAAGCTAAAGCAAAGCTTGAATTGGCTTGCCCAGGCATTGTTTCTTGTGCTGATATACTTGCTCTTTTAGCAAGAGATGCGGTTGCCATGTCTGGAGGTCCATATTGGAAAGTACTAAAAGGACGGAAAGATGGAAGGGTATCAAAGGCATCTGATACCGTCAACTTACCGGCCCCAACCTTCAATGTAGACCAACTCATTCAGAGCTTTGCTAAGAGAGGGTTGGGAGTTAAAGATATGGTGACTTTATCTGGAGGACACACTCTGGGTTTCTCATATTGTTCTTCCTTTGAGGCTCGTCCTCATAATTTCAGTTCTGTGCATGACATTGACCCAAGGTTGAACACTGAATTTGCACTAAACCTAAAAAATAAGTGCCCAAACCCAAATAACAACCAAAATGCAGGACAATTCCTGGACTCAACAACATCAGTGTTTGATAATGACTACTACAAACAACTGCTGGCTGGAAAAGGTGTGTTTTCTTCCGATCAGTCACTTGTTGGTGATTACAGAACTATATGGATTGTTGAAGCATTTGCAAGAGACCAGAGTTTGTTTTTCAAAGAGTTTGCAGCTTCAATGTTGAAACTTGGAAATCTAAGAGGCTCCGATAATGGAGAAGTGAGACTTAATTGCAGGATTGTGAATTGA 780 0.4154 MFFHDCFIRGCDASVLLDSTATNQAEKDGPPNISVRSFYVIDEAKAKLELACPGIVSCADILALLARDAVAMSGGPYWKVLKGRKDGRVSKASDTVNLPAPTFNVDQLIQSFAKRGLGVKDMVTLSGGHTLGFSYCSSFEARPHNFSSVHDIDPRLNTEFALNLKNKCPNPNNNQNAGQFLDSTTSVFDNDYYKQLLAGKGVFSSDQSLVGDYRTIWIVEAFARDQSLFFKEFAASMLKLGNLRGSDNGEVRLNCRIVN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1969 259 PANTHER PEROXIDASE 66 1 258 - -
Mal1g1969 259 PRINTS Haem peroxidase superfamily signature 56 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Haem peroxidase superfamily signature 121 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Haem peroxidase superfamily signature 74 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Mal1g1969 259 Gene3D - 1 259 - -
Mal1g1969 259 SUPERFAMILY Heme-dependent peroxidases 1 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PANTHER PEROXIDASE 25-RELATED 1 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 Gene3D Peroxidase, domain 2 99 240 - -
Mal1g1969 259 CDD secretory_peroxidase 1 258 IPR033905 GO:0004601|GO:0042744
Mal1g1969 259 PRINTS Plant peroxidase signature 195 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Plant peroxidase signature 120 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Plant peroxidase signature 179 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Plant peroxidase signature 36 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Plant peroxidase signature 74 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Plant peroxidase signature 55 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 PRINTS Plant peroxidase signature 235 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 ProSiteProfiles Plant heme peroxidase family profile. 1 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mal1g1969 259 Pfam Peroxidase 1 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1969 Mal-Chr1 25881368 25882382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1969 1 259 Peroxidase AT5G51890 71.538 1.75e-140 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1969 K00430 - gmx:100799516 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1969 1 25881368 25882382 Mal1g1969 1 25881368 25882382 ECH