Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1967 ATGGCTAAGGAAAAGGCTCGTATTAACATTGTGGTTATTGGTCATGTTGACTCTGGGAAGTCAACCACTACTGGTCATTTGATCCAGAAGCTTGGAGTTATTGACAAGAGTGTCATTGAGAGATTTGAGAAAGAAGCTTCTGTGATAAACAAGCATTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAGGGCTGAGCGTGAAAGAGGTATCACAATTGACGTTTCTATGCGCAAGTTTGAGACAAACAACTATAAATGCACTGTCATTGATACCCCCGGACACAGGGATTTCATTAAGAACATGATCAACGGGACGTCCCAAGCTGATTGTGCTTTGCTCATTATTGATTCCACTACTGGTTATTTTGAAGCTGGTATGAATGGTCAGACCCGTGAACATGCTCTTCTTGCCTTCACTCTTGGTGTGAATCAAATGATCTGCTGCTGCAACAAGATGGATGCCACTACACCCAAATACTCCCAGTATAGGTATCTAGAAATTCTGAACCAAGTTTTACCCTTTTTGATCAAGGTTGGCTATAACCCATATAAAGTTCCATTTGTTCCCATCTCTGGTTTTGAGGGAGATAACTTGATTGAGCCCTCTACTAATATTCGCTGGTACTATGGTCCCACCCTTCTTCAAGCTCTTGACCAAATCAACCAGCCTAAGAGGCCATCAAACATGCCTCTCCGACTACCACTTCAGGGTGTCTACAAGATTGGAGGAATCGGAACTGTGGCTGTGGGATGTGTTGCGACTGGTTTCTTGAACCCTGGAATGTTGGTGACTTTTGCCCCAACTGGGCTGCAAGATGAAGTGAAGTCCGTGGAGATGCACCGTGATCCTGGTGACATTGTGGAATTTAGTGAGATATACCGTGATGCTCTCAATGTGGCCTATCCTGGTGACATTGTGGAATTTAGTGTTAATGCTTCTGCTAGGGATCTCAAGCGAGGCTATGTTGCCTCAAACTCCGAGGATGACCCAGCCATGGAGACCGCTCACTTTACATCTCATGTTATCATCGCGAATCACCCTGGCCAGATTAGAAATGGCTATACACCTGTTCTTGACTGCCACACCTCCCACACTGCTGTCAAGTTTGTTGAGCTTATTTCCAAGAATGACATTCGTTCCAGTCAGGTAATTGAGAAGAAACCTGAATTCTTTAAGAGTGGTGATGCTGGTCTTATTAAGATGATTCCCACCAAGCCTATGGTGGTAGAGCCTTTCTCTCAATTTCCTCCACTCGGCCGGTTTGCTGTCAGAGACATGCATCAAACTGTGGCTGTTGGTGTCGTCCAGTCTGTGACGAGGAAGATTCATGATGCAAGAGCTGCCTTTGCCAAATGCCAAAAGCGAAAGTTAAATTACCAAGGCAATTACACAGAACAGGACATTGAAACAGGGGGAGCTCTTGCTGACAGAGATAAGCTTGAGTCACTATGCATGGAGTTACAACATCAAAATAAAATGCTGATGGAAGAATGCAAACGTGTATCTACTGAGGGGCAACAATTAAAGCTGGACTTTTCAGCCAAGTTCCAAGATACAATCAAGAAAATTCATCCTGACAATGCCTTTGAGGAATGCATAAGAGAAGAGCTTATCCCTGCAAATGAGATAGAGGTGACTTTTTCAGATATTGGTGCTTTGGATGATGCTAAAGAATCACTTGAAGAAGCGGTTATGCTTCCCCTTAGAAGACCTGATCTATTCAAAGGTGAAGGGGTTCTGAAGCCATGTAAAGGTGTATTACTTTTTGGACCTCCTGGTACAGGAAAGACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTCTCTCCGTCCACCATCACTTCAAAGTGGTTCGGACAACCTGAAAAGAACGTCCGAGCTCTGTTTTCACTAGCGGCAGAGGTTGCCCCAACTATTATTTTCATTGATGAAGTGGATAGCATGCTTGGGAAGCGGTCTAGCGTTCATGATAACAACTCAATGAGAAGGATGAAAAATGAATTCATGTCACGATGGGATGGACTATTGTCAAAACCTGATGAGAAAATTACTGTTCTTGCTGCCACCAACATGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTCAGCGAAGGATCATGGTTGGTCTTCCGTCTGCTGAAAACAGGGAAACGATCTTGAAAACTCTTCTAGCTAAGGATAAACATGAAGATATAGACTTCAAAGAGCTTTCAACTATGACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCATGACTGCAGCATATTTCCCCCTTAAGGAGCTAACACAACAGGAGAAGGTTAAAGAAATGAAAAAGAAGAAAAAGGTGGAAGAAGTTGAAATCTTAGAAGATGCTTCCAATGCTACCATAGATGATAAAGAAGATCAAGTGATTGCCCTCAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAATAAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCATTAATGAACAAGTTGAAGGAGTGGAATGGTTTGTATGGAGAAGGAGTTTCCAGGAAGAAAGAGGAGCAACTCAGTTATTTTCTTTAG 2592 0.4302 MAKEKARINIVVIGHVDSGKSTTTGHLIQKLGVIDKSVIERFEKEASVINKHSFKYAWVLDKLRAERERGITIDVSMRKFETNNYKCTVIDTPGHRDFIKNMINGTSQADCALLIIDSTTGYFEAGMNGQTREHALLAFTLGVNQMICCCNKMDATTPKYSQYRYLEILNQVLPFLIKVGYNPYKVPFVPISGFEGDNLIEPSTNIRWYYGPTLLQALDQINQPKRPSNMPLRLPLQGVYKIGGIGTVAVGCVATGFLNPGMLVTFAPTGLQDEVKSVEMHRDPGDIVEFSEIYRDALNVAYPGDIVEFSVNASARDLKRGYVASNSEDDPAMETAHFTSHVIIANHPGQIRNGYTPVLDCHTSHTAVKFVELISKNDIRSSQVIEKKPEFFKSGDAGLIKMIPTKPMVVEPFSQFPPLGRFAVRDMHQTVAVGVVQSVTRKIHDARAAFAKCQKRKLNYQGNYTEQDIETGGALADRDKLESLCMELQHQNKMLMEECKRVSTEGQQLKLDFSAKFQDTIKKIHPDNAFEECIREELIPANEIEVTFSDIGALDDAKESLEEAVMLPLRRPDLFKGEGVLKPCKGVLLFGPPGTGKTMLAKAIANEAGASFINVSPSTITSKWFGQPEKNVRALFSLAAEVAPTIIFIDEVDSMLGKRSSVHDNNSMRRMKNEFMSRWDGLLSKPDEKITVLAATNMPFDLDEAIIRRFQRRIMVGLPSAENRETILKTLLAKDKHEDIDFKELSTMTEGYSGSDLKNLCMTAAYFPLKELTQQEKVKEMKKKKKVEEVEILEDASNATIDDKEDQVIALRPLNMEDMRQAKNKVAASFAAEGSLMNKLKEWNGLYGEGVSRKKEEQLSYFL* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1967 863 ProSitePatterns AAA-protein family signature. 690 709 IPR003960 GO:0005524|GO:0016887
Mal1g1967 863 SUPERFAMILY Translation proteins 230 332 IPR009000 -
Mal1g1967 863 CDD EF1_alpha_III 333 436 - -
Mal1g1967 863 Gene3D Translation factors 227 326 - -
Mal1g1967 863 SMART AAA_5 583 720 IPR003593 -
Mal1g1967 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 766 IPR027417 -
Mal1g1967 863 Coils Coil 478 505 - -
Mal1g1967 863 Pfam Myosin-like coiled-coil protein 451 525 IPR026183 GO:0019905
Mal1g1967 863 Pfam ATPase family associated with various cellular activities (AAA) 587 717 IPR003959 GO:0005524|GO:0016887
Mal1g1967 863 CDD EF1_alpha 9 225 - -
Mal1g1967 863 Pfam Elongation factor Tu C-terminal domain 333 439 IPR004160 -
Mal1g1967 863 Pfam AAA+ lid domain 739 779 IPR041569 -
Mal1g1967 863 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 PRINTS GTP-binding elongation factor signature 146 155 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 228 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 Gene3D - 1 224 IPR027417 -
Mal1g1967 863 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 336 439 IPR009001 -
Mal1g1967 863 Pfam Elongation factor Tu GTP binding domain 7 220 IPR000795 GO:0003924|GO:0005525
Mal1g1967 863 PANTHER ELONGATION FACTOR 1-ALPHA 1 446 - -
Mal1g1967 863 CDD AAA 585 718 - -
Mal1g1967 863 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 1 442 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mal1g1967 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 247 IPR027417 -
Mal1g1967 863 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mal1g1967 863 Gene3D - 545 829 IPR027417 -
Mal1g1967 863 Gene3D Translation factors 334 440 - -
Mal1g1967 863 Gene3D - 719 826 - -
Mal1g1967 863 PANTHER TRANSLATION FACTOR 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1967 Mal-Chr1 25868991 25875234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1967 1 442 Eukaryotic Initiation Factors Gene Family AT5G60390 73.258 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1967 K03231 - gmx:100801611 652.899