LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g1964	ATGGGCAAGGATTGGTATTGGGGTGGAAGAAGAAGATCCTCCAACTCCAAGAGAAGACAAGTTGAAACAGATATCCCTTCTGGAGGTTGCATGTGTGCTGTCTTTCAAGCCTTTGATTTTCATCCCTTTAACCTTTCCATTAACCAACAATCCACTTTCAACTCTTCTTCTCCCATTACCACTCTCCCCAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATCAGAAGATGGTACACTCTCATCCATCTCAAAACAAGATAGTTTCAAAATCCCAAAGAACATAAGAATCAAAACAAAAGGAGGAAGTTTCAATGATCTTTCCAATGAACTTTGCTCTCCTGGTACAAAGACACCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCAAATTCCCCCTCTAATTCCTCTTCTTCTTCATCTCTCTCCACTCCAAAAAGACAAAGCCATTACCACAATAGACCAAAGCAAGACATCAAGATAATGAAACACAGACACAGCACAGACAGTGTCATCAAAACACCAAGATTGTCCTCAGAAAAAACATCATATGTTGAGCATAGACTATCTCTCCAAATCAACAAAGAAAACAGGAATGTTGGTGAAGATTTAGAGACTCCTAGGTCTTCATTCTCAAAAAGGAAATTTTTTGATGATAACAACAATTGCAAAAGTCCAAGTCACTATGCAAGGCAAATTGTTAAACAGGTTAAAGAAAGTGTGAGTAGAAAAGTTGGTATTGACATCACCAACACAGTCAAAAACAGAGAACAAGAAAAAGTAAAACAAGATTTTGTTGCTCAAATCAAATTCAAGAAAGCTCTTAAACCATCAATGAAACCACTAGATGAATCAAACCAAGGTAAACACTCAACAAATTCATCTCATTCCCCAAGACTCAGCAGATTCAATGATACAAACCACAAACATTCACCAACTACTACTCCAAGAGACCAAAACACACATCAAGTACTAAAACAATCATCACCACCACATGTAGTCAACATTGAAGCACAAGTTTCAAGAGTTTCAACAAAGCCAAAAACACAAGCAATGTCAGAGAAGGAGGACAAAAAATCTTTCCCAAAATGCAAGAAAACAGGACATGGGAATTTGAGTCCACGGATCAACAGCAATAAGCCTCCACAGACATCATCAATCAGAAAGAAGCAAGAAGAATCATTCATAACCAATAGAGGTAATGATATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAATAACAATGTCCCAAATCTTCTCCCTCTCAAAACACACCCTTCTCTTCCAGCTACAAAAGTTCATCAAAAACAGGTCAATGATGATGACCAAGAAGCCAAAAACATGTCACAGTTATTTAGTTCTTCGTGCCACAACAAGTACACACTCGCCACCCGAGGAACAACCAATGATGGATCAAAATCCAACGGTTTCGCCGCGGCCACCGGAGCTGAGAATGAAGGATCAGAATACCAATACATCACAACCATTCTAAACCGTTCTGGAATACACAGGACAACAGTAACCAACCTTCAACATTTTCAATGGTTCTCTTCAACACATCCATTAGACCCATCAATTTTTCACCGTCTTGAACTCTACCCAACATCTAAAGATAGCAACTTTACGCAGAAAAATCTCATGGGTCCACGTTGTAACCGTAGATTACTGTTTGATTTAGTGGATGAAGTGTTGTCGGAAATTCTTATTAGGCCAAAGTGTTATCATGGATTGTTGTTGGAGACAGTTTGGAAAAGAGTTCGGAGTTTCCCACGTGCGAAATGTGAGGTTTTGGAAGACATTGATGGGTTGATAGAGATGAAGGAGGTGATGGATAAGGTTAAGGAAGAAGAAGAAGAGGAAAAGTTGGTGGCGGAGATTGAAGGGAAGGTGTTGGATATGTTGGTGAATGAAACATTAACCGTTATGGTAAGTCGGTACGTATAG	1962	0.393	MGKDWYWGGRRRSSNSKRRQVETDIPSGGCMCAVFQAFDFHPFNLSINQQSTFNSSSPITTLPKGAEAPRNSLESEDGTLSSISKQDSFKIPKNIRIKTKGGSFNDLSNELCSPGTKTPTLVARLMGLDLLPDANSPSNSSSSSSLSTPKRQSHYHNRPKQDIKIMKHRHSTDSVIKTPRLSSEKTSYVEHRLSLQINKENRNVGEDLETPRSSFSKRKFFDDNNNCKSPSHYARQIVKQVKESVSRKVGIDITNTVKNREQEKVKQDFVAQIKFKKALKPSMKPLDESNQGKHSTNSSHSPRLSRFNDTNHKHSPTTTPRDQNTHQVLKQSSPPHVVNIEAQVSRVSTKPKTQAMSEKEDKKSFPKCKKTGHGNLSPRINSNKPPQTSSIRKKQEESFITNRGNDIKTKSKRTHPLSNNNVPNLLPLKTHPSLPATKVHQKQVNDDDQEAKNMSQLFSSSCHNKYTLATRGTTNDGSKSNGFAAATGAENEGSEYQYITTILNRSGIHRTTVTNLQHFQWFSSTHPLDPSIFHRLELYPTSKDSNFTQKNLMGPRCNRRLLFDLVDEVLSEILIRPKCYHGLLLETVWKRVRSFPRAKCEVLEDIDGLIEMKEVMDKVKEEEEEEKLVAEIEGKVLDMLVNETLTVMVSRYV*	654

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mal1g1964	653	MobiDBLite	consensus disorder prediction	133	152	-	-
Mal1g1964	653	Pfam	DUF761-associated sequence motif	113	136	IPR032795	-
Mal1g1964	653	PANTHER	DUF4378 DOMAIN PROTEIN	1	650	-	-
Mal1g1964	653	MobiDBLite	consensus disorder prediction	396	413	-	-
Mal1g1964	653	Pfam	Domain of unknown function (DUF4378)	495	643	IPR025486	-
Mal1g1964	653	MobiDBLite	consensus disorder prediction	281	427	-	-
Mal1g1964	653	MobiDBLite	consensus disorder prediction	288	352	-	-
Mal1g1964	653	MobiDBLite	consensus disorder prediction	54	85	-	-
Mal1g1964	653	PANTHER	LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN	1	650	-	-
Mal1g1964	653	MobiDBLite	consensus disorder prediction	353	368	-	-

Showing 1 to 10 of 13 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g1964	Mal-Chr1	25819082	25821326	Dispersed

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g1964	94	653	TRM (TON1 Recruiting Motif) Superfamily	AT5G62170	31.680	1.15e-46	172

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g1964	-		-	mtr:MTR_1g101910	1048.11

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g1964	1	25819082	25821326	Mal1g1964	1	25819082	25821326	ECH
	Mal6g3008	6	83842259	83846172	Mal1g1964	1	25819082	25821326	PCT

Showing 1 to 2 of 2 entries

Previous1Next