Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1964 ATGGGCAAGGATTGGTATTGGGGTGGAAGAAGAAGATCCTCCAACTCCAAGAGAAGACAAGTTGAAACAGATATCCCTTCTGGAGGTTGCATGTGTGCTGTCTTTCAAGCCTTTGATTTTCATCCCTTTAACCTTTCCATTAACCAACAATCCACTTTCAACTCTTCTTCTCCCATTACCACTCTCCCCAAAGGAGCTGAAGCACCTAGGAATAGCTTGGAATCAGAAGATGGTACACTCTCATCCATCTCAAAACAAGATAGTTTCAAAATCCCAAAGAACATAAGAATCAAAACAAAAGGAGGAAGTTTCAATGATCTTTCCAATGAACTTTGCTCTCCTGGTACAAAGACACCAACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCAAATTCCCCCTCTAATTCCTCTTCTTCTTCATCTCTCTCCACTCCAAAAAGACAAAGCCATTACCACAATAGACCAAAGCAAGACATCAAGATAATGAAACACAGACACAGCACAGACAGTGTCATCAAAACACCAAGATTGTCCTCAGAAAAAACATCATATGTTGAGCATAGACTATCTCTCCAAATCAACAAAGAAAACAGGAATGTTGGTGAAGATTTAGAGACTCCTAGGTCTTCATTCTCAAAAAGGAAATTTTTTGATGATAACAACAATTGCAAAAGTCCAAGTCACTATGCAAGGCAAATTGTTAAACAGGTTAAAGAAAGTGTGAGTAGAAAAGTTGGTATTGACATCACCAACACAGTCAAAAACAGAGAACAAGAAAAAGTAAAACAAGATTTTGTTGCTCAAATCAAATTCAAGAAAGCTCTTAAACCATCAATGAAACCACTAGATGAATCAAACCAAGGTAAACACTCAACAAATTCATCTCATTCCCCAAGACTCAGCAGATTCAATGATACAAACCACAAACATTCACCAACTACTACTCCAAGAGACCAAAACACACATCAAGTACTAAAACAATCATCACCACCACATGTAGTCAACATTGAAGCACAAGTTTCAAGAGTTTCAACAAAGCCAAAAACACAAGCAATGTCAGAGAAGGAGGACAAAAAATCTTTCCCAAAATGCAAGAAAACAGGACATGGGAATTTGAGTCCACGGATCAACAGCAATAAGCCTCCACAGACATCATCAATCAGAAAGAAGCAAGAAGAATCATTCATAACCAATAGAGGTAATGATATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAAATAACAATGTCCCAAATCTTCTCCCTCTCAAAACACACCCTTCTCTTCCAGCTACAAAAGTTCATCAAAAACAGGTCAATGATGATGACCAAGAAGCCAAAAACATGTCACAGTTATTTAGTTCTTCGTGCCACAACAAGTACACACTCGCCACCCGAGGAACAACCAATGATGGATCAAAATCCAACGGTTTCGCCGCGGCCACCGGAGCTGAGAATGAAGGATCAGAATACCAATACATCACAACCATTCTAAACCGTTCTGGAATACACAGGACAACAGTAACCAACCTTCAACATTTTCAATGGTTCTCTTCAACACATCCATTAGACCCATCAATTTTTCACCGTCTTGAACTCTACCCAACATCTAAAGATAGCAACTTTACGCAGAAAAATCTCATGGGTCCACGTTGTAACCGTAGATTACTGTTTGATTTAGTGGATGAAGTGTTGTCGGAAATTCTTATTAGGCCAAAGTGTTATCATGGATTGTTGTTGGAGACAGTTTGGAAAAGAGTTCGGAGTTTCCCACGTGCGAAATGTGAGGTTTTGGAAGACATTGATGGGTTGATAGAGATGAAGGAGGTGATGGATAAGGTTAAGGAAGAAGAAGAAGAGGAAAAGTTGGTGGCGGAGATTGAAGGGAAGGTGTTGGATATGTTGGTGAATGAAACATTAACCGTTATGGTAAGTCGGTACGTATAG 1962 0.393 MGKDWYWGGRRRSSNSKRRQVETDIPSGGCMCAVFQAFDFHPFNLSINQQSTFNSSSPITTLPKGAEAPRNSLESEDGTLSSISKQDSFKIPKNIRIKTKGGSFNDLSNELCSPGTKTPTLVARLMGLDLLPDANSPSNSSSSSSLSTPKRQSHYHNRPKQDIKIMKHRHSTDSVIKTPRLSSEKTSYVEHRLSLQINKENRNVGEDLETPRSSFSKRKFFDDNNNCKSPSHYARQIVKQVKESVSRKVGIDITNTVKNREQEKVKQDFVAQIKFKKALKPSMKPLDESNQGKHSTNSSHSPRLSRFNDTNHKHSPTTTPRDQNTHQVLKQSSPPHVVNIEAQVSRVSTKPKTQAMSEKEDKKSFPKCKKTGHGNLSPRINSNKPPQTSSIRKKQEESFITNRGNDIKTKSKRTHPLSNNNVPNLLPLKTHPSLPATKVHQKQVNDDDQEAKNMSQLFSSSCHNKYTLATRGTTNDGSKSNGFAAATGAENEGSEYQYITTILNRSGIHRTTVTNLQHFQWFSSTHPLDPSIFHRLELYPTSKDSNFTQKNLMGPRCNRRLLFDLVDEVLSEILIRPKCYHGLLLETVWKRVRSFPRAKCEVLEDIDGLIEMKEVMDKVKEEEEEEKLVAEIEGKVLDMLVNETLTVMVSRYV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1964 653 MobiDBLite consensus disorder prediction 133 152 - -
Mal1g1964 653 Pfam DUF761-associated sequence motif 113 136 IPR032795 -
Mal1g1964 653 PANTHER DUF4378 DOMAIN PROTEIN 1 650 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 396 413 - -
Mal1g1964 653 Pfam Domain of unknown function (DUF4378) 495 643 IPR025486 -
Mal1g1964 653 MobiDBLite consensus disorder prediction 281 427 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 288 352 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 54 85 - -
Mal1g1964 653 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 650 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 353 368 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 375 395 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 132 162 - -
Mal1g1964 653 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1964 Mal-Chr1 25819082 25821326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1964 94 653 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 31.680 1.15e-46 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1964 - - mtr:MTR_1g101910 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1964 1 25819082 25821326 Mal1g1964 1 25819082 25821326 ECH
Mal6g3008 6 83842259 83846172 Mal1g1964 1 25819082 25821326 PCT