Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1946 ATGGAGGCACAACAAAATAAAGATATACGTGTTTATTCTATGGAACTAAACAAAATAGTGCAAACTATATTTGCTAGAAACTATTTAAGTTATTTAGTTTCAGCATTCATGAAGATAAAGGAAAATAACAGTTCTTCAAAAGATAACAGCAACAGCCATATTAAGAATGTTAAGTATGAAGTAGACATGACAATGGTTACAGCACAAGATTTTGCATGGAGTAATGGTCTTAAACTTAAGCTTCAAAAGGAATGTCATGTCATCTACCAAAAAAAAAAGGAATGTCATGTCATGATGTAG 300 0.3067 MEAQQNKDIRVYSMELNKIVQTIFARNYLSYLVSAFMKIKENNSSSKDNSNSHIKNVKYEVDMTMVTAQDFAWSNGLKLKLQKECHVIYQKKKECHVMM* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1946 99 PANTHER TRANSCRIPTION FACTOR BHLH146 3 94 - -
Mal1g1946 99 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 94 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1946 Mal-Chr1 25563456 25563755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1946 6 81 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 44.156 1.10e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1946 - K16572 mtr:MTR_4g127700 115.931