Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1925 ATGGACTTGCCGAAACACCGTGCCACACGAACAACCTCTCTAAGAGACGTATCTGACTCCTCCACTGGTAGCTGGGATGCCCTCGAATGGACCAAAATTGAGCCAATTGCGCGCTTCGTCTCTCCCGCGAATCTCGATTTCTTGCTCGATGACGAACGAGTTATGGCCGAAGGACACGGTGTTGTTCTTGTCAATACAGATGATGCAGGCGTGTTGATTGTAACAAACTTTCGCGTAATATTTTTGAGTGAAGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCACTAGCAACAATTGAGAAGTTTAACAAGACAGCTGTAAAGGCTCAGTCAAATACTCATCAATTAGACAAGACACCAACACAACGACTGCTGCAGGTGATTGGGAAAGATATGAGAATTATAGTCTTTGGTTTTAGGCCTCGTACAAAACAGAGACGTGCAATATATGATGCACTACTGAAGTGTACAAAATCAACAGTATTATGGGATCTTTATGCTTTTTCGTCCGGGCCTTCCACTTTTAAGAACACCTCTCCATTGGTGCGATTATTGGATGAGTATTTTCGACTCATTGGCAAAGCTTCTCATCATGCTTCAATGGACATGATTGAAAGTGGCTCCTTCACCCTATCAAATGACTTGTGGAGAATAAGTGGCGTGAATTCCAGTTATACAATGTGCCAGAGTTATCCATTTGCTTTGGTTGTTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTGCAAATTCCGTGCAAGATGCCGTCTGCCTGTAATTTCTTGGTGTCATCCTGTTACTGGTGCGGTTCTTGCACGTTCTTCCCAACCTTTAGTAGGTCTCATGATGAATATGAGGAGCAACATGGACGAAAAACTTGTGGCCGCACTTTGCGGCAACCTTGATGATGGCTCAAGGAGAAAGCTATATATTGCTGATGCAAGACCAAGGAAAAACGCATTAGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGATAGTCTTTTTTGGGATAGACAACATTCATGCAATGAGAGAGAGCTTTGTTCGTCTCCGAGAATTCATCGACACTCATGGCAGAACATCATCGGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCGATATGGGGTGGCGGCAATTTGAGCAGTATGTCGGCTTCAGTATCAACCCTTGGGGACAGTGGATGGTTATTGCATGTTCAGAATGTCTTAGCTGGTGCAGCTTGGATTGCTGCTCGTGTTGCTATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGATGGGATAGGACAAGCCAGTTAGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCAGAGGGTTTCAGGCACTTGTTGAAAAGGACTGGCTAGCATTTGGTCATCCATTTTCTGATCGTGTGGGAACACCATCTATCTCGGGATGTGGCAACATCTCTTTTGAGTTATCTAGGCAGTCTTCAACTGGCATCCCATCATCACCAATGCGCCAGTCATCAGGGACATCCGTGTCTCAACCTCCAGCTCCATCTCATGCACATAGCTCAGGCAACTACTCTCCCATTTTTTTGCAGTGGGCTGATTGTGTGGCACAACTGCTGAGGATGTATCCTTTTGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTTTCTTCTCGCTTTGGAAACTTCTTCTTTAATAGTGAAAAAGAGAGGCTGCAGTGCAATGTGTTTGAAAGTTGTGGATGTTTGTGGGCATACTTGGCTGATAGGCGGGCATTGGAAGGCGGTTCACATGCACATTGTAATCCCTTTTATGATCCACTGAAGTACAACGGTCCTCTTCTGCCCCCAGCAGCAGCGTTAGCCCCAACTATATGGCCCCAATTCCACCTTCGTTGGGCCTGCCCGGAAGAAGCACAGAGTGGGGAGATTGAAGCACAGTGTAGGAAGATAATACTGAAAAACTCTGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCTAGAGAAAATACAAATGCTATGCAATCATTGAATGCTGAATTGCGGCGTGAGAAACTGTTAAACATCTCAGCTATGAACACGGCAAAGAGGATAACCAAAGAAAATATGGACATAAAGCGTGCAATTCAGTCAATTGGGTGCAAGATTCACATTTCTAGTAGTGGTGATTGCATTGTTGACATTGAAAACAACCCAGCGGGAGCACATCCAAACTTGTATTGTTCCTCTAGGCAAGGATCAAGTAGTGCTGTGATTAACGACAAAAAGGATCTATATGTGTCTGTAACAGAAGATGAAGATGATGATGGAAACAATGTTATTGGTCGAATATGTGACACTCTATGCCCATTTCGCACTAAAGATGGAGGCTGCAGGTGGCCAAATGGTGGTTGTGCTCAACTAGGTAGCCAGTTTGTTGGTTTGAAGGCGAATTTTGATGCATTTGACCAACTTTCAATTGATGACAGTTATTTCAAGCCCAAGTAA 2538 0.4409 MDLPKHRATRTTSLRDVSDSSTGSWDALEWTKIEPIARFVSPANLDFLLDDERVMAEGHGVVLVNTDDAGVLIVTNFRVIFLSEGTRKVIALGTIPLATIEKFNKTAVKAQSNTHQLDKTPTQRLLQVIGKDMRIIVFGFRPRTKQRRAIYDALLKCTKSTVLWDLYAFSSGPSTFKNTSPLVRLLDEYFRLIGKASHHASMDMIESGSFTLSNDLWRISGVNSSYTMCQSYPFALVVPKSISDDEVLQACKFRARCRLPVISWCHPVTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCGNLDDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESFVRLREFIDTHGRTSSDGMSSFLRHGGSIWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFRGFQALVEKDWLAFGHPFSDRVGTPSISGCGNISFELSRQSSTGIPSSPMRQSSGTSVSQPPAPSHAHSSGNYSPIFLQWADCVAQLLRMYPFAFEFSAAFLVDFLDCMLSSRFGNFFFNSEKERLQCNVFESCGCLWAYLADRRALEGGSHAHCNPFYDPLKYNGPLLPPAAALAPTIWPQFHLRWACPEEAQSGEIEAQCRKIILKNSEMQKAKEVAERKARENTNAMQSLNAELRREKLLNISAMNTAKRITKENMDIKRAIQSIGCKIHISSSGDCIVDIENNPAGAHPNLYCSSRQGSSSAVINDKKDLYVSVTEDEDDDGNNVIGRICDTLCPFRTKDGGCRWPNGGCAQLGSQFVGLKANFDAFDQLSIDDSYFKPK* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1925 845 CDD PTP-MTM-like 257 547 - -
Mal1g1925 845 ProSitePatterns Tyrosine specific protein phosphatases active site. 434 444 IPR016130 GO:0016311|GO:0016791
Mal1g1925 845 SUPERFAMILY PH domain-like 48 170 - -
Mal1g1925 845 Coils Coil 677 697 - -
Mal1g1925 845 Gene3D - 60 158 IPR011993 -
Mal1g1925 845 ProSiteProfiles Myotubularin phosphatase domain. 194 645 IPR010569 -
Mal1g1925 845 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 210 649 IPR029021 -
Mal1g1925 845 SMART gram2001c 37 107 IPR004182 -
Mal1g1925 845 MobiDBLite consensus disorder prediction 501 528 - -
Mal1g1925 845 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 16 844 - -
Mal1g1925 845 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g1925 845 PANTHER MYOTUBULARIN-RELATED 16 844 IPR030564 -
Mal1g1925 845 Pfam Myotubularin-like phosphatase domain 167 586 IPR010569 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1925 1 845 Protein tyrosine phosphatase (PTP) family AT3G10550 67.175 0.0 1146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1925 K18081 - gmx:100781842 1391.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1925 1 25276119 25289800 Mal1g1925 1 25276119 25289800 ECH