Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1908 ATGAACTGTCTTCAGAATCTTCCCAGATCCTCCTCTGTTTTACAATTCAACACTCTTGTTGCTCCTCATCCTGCTCGCCACCACAACATCATTCTTCCTTCTCTATCCCTCGGAACAACCATCCGTAAATCTCATCACAATCTAACCATGTCACTTAAGGCTGCTTCTGGTTCTATACCAAGTGCAGAGACAAGTAGCTCCTCCGATGTCGAGGAGGAGGAGGTTAAGTCTGAGATATACAGCAACAACATGACAGAAGCCATGGGTGCTGTTTTAACTTATAGGCATGAATTAGGAATGAACTACAACTTCATCCGTCCAGACTTGATTGTCGGATCATGCCTGCAGACTCCTGAAGATGTTGATAAGCTGCGTAAAATCGGAGTCAAAACTATATTTTGCTTGCAACAAAACTCAGATCTAGAATATTTTGATGTTGATATCAATGCCATACGAGAATATGCTGACACATGCAATGACATTCAACACTTGCGTGCTGAGATAAGGGACTTCGATTCATTTGATTTACGGAAGCGACTTCCAGCTGTAATTAGCAAATTATATAAGGCAATTAATTCCAATGGAGGTGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGTTGGCATACATGTTTTGGGTTCTGGGTTATAAACTCAATGAGGCTAATGCACTACTTCTGAGCAAAAGGTCATGCTTTCCAAAGCTGGATGCCATAAAAAGTGCAACGGCCGATATTCTTACAGGCCTCAGTAAGAAGCCTGTCACTTTGTCGTGGGGACACCGCAATTGCTCTACGGTGGAAATTTCAGGACTTGATATTGGATGGGGGCAGAGAGTGCCCTTAAGTTTCGATGAAAATCAGGGTTCATGGTTTCTCAAGAAGGAAATGTTTGAAGGGCGCTACGAGTACAAGTACATTGTTGATGGAGAATGGACGTGCAATAAGGATGAGCTTGTAACCTCTCCCAATAAAGATGGCCATGTCAACAATTTTATCGAAGTCCTTGATAATGCGGACAGTGGCCGTGCCTCCCTTCGGGAGAGAGTGACTGGTGATGATCCTGATCTCACAAAGGATGAACGAAACAGAATAATAGAGTTTCTGGAAGCTTGTCCCAATGAGGATCTCTGA 1152 0.434 MNCLQNLPRSSSVLQFNTLVAPHPARHHNIILPSLSLGTTIRKSHHNLTMSLKAASGSIPSAETSSSSDVEEEEVKSEIYSNNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQNSDLEYFDVDINAIREYADTCNDIQHLRAEIRDFDSFDLRKRLPAVISKLYKAINSNGGVTYIHCTAGLGRAPAVALAYMFWVLGYKLNEANALLLSKRSCFPKLDAIKSATADILTGLSKKPVTLSWGHRNCSTVEISGLDIGWGQRVPLSFDENQGSWFLKKEMFEGRYEYKYIVDGEWTCNKDELVTSPNKDGHVNNFIEVLDNADSGRASLRERVTGDDPDLTKDERNRIIEFLEACPNEDL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1908 383 CDD E_set_AMPKbeta_like_N 260 341 - -
Mal1g1908 383 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 1 381 - -
Mal1g1908 383 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 98 243 IPR029021 -
Mal1g1908 383 CDD DSP_laforin-like 100 247 IPR045204 GO:0019203|GO:0046838
Mal1g1908 383 Pfam Dual specificity phosphatase, catalytic domain 142 239 IPR000340 GO:0008138|GO:0016311
Mal1g1908 383 SMART dsp_5 101 251 IPR020422 GO:0006470|GO:0008138
Mal1g1908 383 ProSiteProfiles Dual specificity protein phosphatase domain profile. 101 258 IPR020422 GO:0006470|GO:0008138
Mal1g1908 383 Pfam Glycogen recognition site of AMP-activated protein kinase 260 344 IPR032640 -
Mal1g1908 383 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 1 381 IPR030079 GO:0005982|GO:0007623|GO:0019203
Mal1g1908 383 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 178 236 IPR000387 GO:0016311|GO:0016791
Mal1g1908 383 SUPERFAMILY E set domains 259 342 IPR014756 -
Mal1g1908 383 Gene3D Immunoglobulins 256 346 IPR013783 -
Mal1g1908 383 Gene3D Protein tyrosine phosphatase superfamily 94 374 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1908 Mal-Chr1 24848135 24854205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1908 100 378 Protein tyrosine phosphatase (PTP) family AT3G52180 67.742 1.22e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1908 - - mtr:MTR_1g090867 684.871