Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1892 ATGCGAAAAGGGTTAAGGTTGGGAAAGGGAAAAAGGGATGATTTTAGAAAGACTTTTAAGGAAGCTAACCCTGATTCCAAGGATGTTAAAAGGGTTGGTAAGGAAGTTGGTGAGAAGTGGAGGTCTTTGACTGATGAAGAGAAGAAGCCTTATTTGGATAGAGTTGTTGAACTGACGGCAGAGTATGAGAAGGCCTATAATGCTGCTGCTGAAAATGAACAATACCCAGCTGTAGCAATTTGTGCAATCCAGATGAAGAATCATTCTTCCCTCAATGGAAAAGTGATAAGGGTCATGTGGTCTAGTCGTGATGCTGATGTAATGAAAAGTGCCAGAGGAAATGTGTTTGTTAAGGTAAGTTATGCAGAATATAGCTTTGATGTGAAATGCTTAAATGATGGCATTCTGTGTCATTCTTATCTATTAAGTGAATTCTAA 438 0.3881 MRKGLRLGKGKRDDFRKTFKEANPDSKDVKRVGKEVGEKWRSLTDEEKKPYLDRVVELTAEYEKAYNAAAENEQYPAVAICAIQMKNHSSLNGKVIRVMWSSRDADVMKSARGNVFVKVSYAEYSFDVKCLNDGILCHSYLLSEF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1892 145 MobiDBLite consensus disorder prediction 7 30 - -
Mal1g1892 145 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 13 73 - -
Mal1g1892 145 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g1892 145 CDD HMGB-UBF_HMG-box 14 65 - -
Mal1g1892 145 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 13 73 - -
Mal1g1892 145 SMART hmgende2 9 71 IPR009071 -
Mal1g1892 145 Pfam HMG (high mobility group) box 13 67 IPR009071 -
Mal1g1892 145 Gene3D High mobility group box domain 12 55 IPR036910 -
Mal1g1892 145 SUPERFAMILY HMG-box 13 67 IPR036910 -
Mal1g1892 145 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 14 70 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1892 Mal-Chr1 24626516 24628373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1892 79 118 Eukaryotic Initiation Factors Gene Family AT2G36660 60.000 2.69e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal1g1892 HMG_box 5.1e-12 CL0114