Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1886 ATGGAAAGTGAAGCAATAGCTTTTCACCAAGGTCCTGGATTCCGATTCCACCCTACCGATGAAGAGATCGTTCGTTTCTACCTCAAAAAGAAAGTCACCGGAGATTTAGCTCCTTGTTACGACTATCTCGCTGTCATCGATATCTACAAGTTCGAACCATGGGACCTTCCCAGTTTGTCGAAGCTGAAGACAAGGGATTTGGAATGGTACTTCTTCACTGTGCTGGACAAGAAGTACGGTAACAGTATCAGGACGAATCGTGCTACTGATAGAGGTTACTGGAAAACTACTGGCAAGGATCGTGCTGTCAAGAATGGTGATGACATTGTTGGGATGAAGAAAACCCTTGTTTATCACTTGGGTCGGGCTCCACATGGTGATCGAAGCAATTGGGTCATGCATGAATACAGAATTGTTGATGAGGCACTGGCCAAAGCTGGAGTGCAGGATGCTTATGTCCTGTGTAGGATCTTCGAGAAGAGTGGTTCGGGGCCTAAGAATGGGGAGAAGTATGGGGCACCCTTTGTAGAGGAGGAATGGGAGAATATTGTTGCTGATGCACTTTTGAAACAAGAAGTGTCTGCTGCTGATGATGTTGATGAACGCGTGAATTATCCCTTTGCAATTCCTGCACCTCATGTTGATCTACGGGTGAATCCCTTGGCGGTTGTTTATCACGAGCCTTTGACAGAAAATGTGCCTGCTCCTACTAATGATGATTATGTTGAAATCGGTGACTTTGACCAGGATCTTGATACCAGTAACACAGTTGGAAGCGCTGAACTTCAATCGAACTTCTGTAATGGGGAGTGTAGTAGCCATCCTCAGTACTCCCAAGCATTTATTAATGAACGTAAGCAATTGGAAGCCACTGTTGGTATGTATGGTCATCAGGTTGATCAGTCTAATAATTTGTCTGATTCATATGGCGTGACTATCAATTCAGTACAAGATGGATACAATGGTGAGACAAACCATAACGAGAATCCTTTGAATTTCAATTTTACATCTGAGGGACCGGATCGATTCTTTGATGCCTGCGGATATTTTGATGGTTTGAATGGCGAATTCATGGAGGCCAATGATTTTAAGAATCCTGACGAGTTTATTCCCACCGAGCTAGATCCTTCTGTCGCTGCAATGCTAGATGAGTACCTTGCATGCCCTGATGAAGACATTTCCAAATATATATCCTTTGATTCTCCTTTGAGTGCAGCGAGTGAAAGCCCCGTTGCTAGCTATGGACAGCCTATCTATGAGCAGAATGCGGAGGGCGAAACCTATGGTAGATCCTTGGCAAACAAACATGTTAATGAAGCGCAGTCTAGTAATGAAGTTTTACCAAAGGAGGATCTAGAGTTGTCAAATTGGGTCTCAGGAGATGCAAACACTTTTGTGAAGCATGCCAATAGTTTGTTGGCCAGCATACCTGCTCCACCTGCATACGCTTCAGAGTTTCCTGCTAAGGAGTTTGCTCATGGGATACATCCTGCTGCTGAGTCTTCCGATTCAGCTCATATAACTGCAGGTATGATCAGCATAACAGACATTACTTTTAGAGGCAATGCGATGGATTGGATGGTGGGCAAGAATGGAGGTTTTAACACCGTTATGTCTACTGGGTTTTCCCAAACTGATGTTAACTCTGCTACTTTGGTGCCTATTTCTGGCCTGGTCTGTAGTAAAACTGCATTTATGTTATCACATGGTTGGGTTTTCTTGACGGGTTTCTCAGTTGTGATTCTTTCACTGAGTTTCAAGATCGGAAGCTTCATGTATACGGGTAAATGA 1791 0.4394 MESEAIAFHQGPGFRFHPTDEEIVRFYLKKKVTGDLAPCYDYLAVIDIYKFEPWDLPSLSKLKTRDLEWYFFTVLDKKYGNSIRTNRATDRGYWKTTGKDRAVKNGDDIVGMKKTLVYHLGRAPHGDRSNWVMHEYRIVDEALAKAGVQDAYVLCRIFEKSGSGPKNGEKYGAPFVEEEWENIVADALLKQEVSAADDVDERVNYPFAIPAPHVDLRVNPLAVVYHEPLTENVPAPTNDDYVEIGDFDQDLDTSNTVGSAELQSNFCNGECSSHPQYSQAFINERKQLEATVGMYGHQVDQSNNLSDSYGVTINSVQDGYNGETNHNENPLNFNFTSEGPDRFFDACGYFDGLNGEFMEANDFKNPDEFIPTELDPSVAAMLDEYLACPDEDISKYISFDSPLSAASESPVASYGQPIYEQNAEGETYGRSLANKHVNEAQSSNEVLPKEDLELSNWVSGDANTFVKHANSLLASIPAPPAYASEFPAKEFAHGIHPAAESSDSAHITAGMISITDITFRGNAMDWMVGKNGGFNTVMSTGFSQTDVNSATLVPISGLVCSKTAFMLSHGWVFLTGFSVVILSLSFKIGSFMYTGK* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1886 596 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 182 - -
Mal1g1886 596 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 238 591 - -
Mal1g1886 596 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
Mal1g1886 596 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Mal1g1886 596 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 238 591 - -
Mal1g1886 596 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 11 182 - -
Mal1g1886 596 Gene3D NAC domain 19 163 IPR036093 GO:0003677|GO:0006355
Mal1g1886 596 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1886 Mal-Chr1 24570887 24573541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1886 11 588 NAC Transcription Factor Family AT5G04410 37.563 3.69e-106 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g1886 NAM 4.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1886 - - mtr:MTR_1g090723 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1886 1 24570887 24573541 Mal1g1886 1 24570887 24573541 ECH